Query= MSMg01no339_c19.b1 MSMg01no339_c19.b1 CHROMAT_FILE:
MSMg01no339_c19.b1 PHD_FILE: MSMg01no339_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:57 2005
(569 letters)
>mm_chr11_81315202_81316171
Length = 970
Score = 1056 bits (546), Expect = 0.0
Identities = 564/570 (98%), Gaps = 1/570 (0%)
Strand = Plus / Minus
Query: 1 agtgtacaaatgttgacagtaccatgtgagtggcaagaagtgcctgtttattaaaattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agtgtacaaatgttgacagtaccatgtgagtggcaagaagtgcctgtttattaaaattgt 711
Query: 61 ttcaatttctaagcatttacttactaatggatctgaaatgaaacttctgatttcttcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ttcaatttctaagcatttacttactaatggatctgaaatgaaacttctgatttcttcagc 651
Query: 121 atatcatattcaacatgcctcacctattttgaacctaatgctgagcactgaaatagtctt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 650 atatcatattcaacatgcctcacctattttgaacctaatactgagcactgaaatagtctt 591
Query: 181 cgtggcggaactcatttccaagggttaatttacgtcttcaaaacctgttctgcatctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cgtggcggaactcatttccaagggttaatttacgtcttcaaaacctgttctgcatctgtg 531
Query: 241 ggcaattcttttatctatcccaaggtttaaaagttttaagaaacgtttaacggctggatc 300
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ggcaattcattcatctatcccaaggtttaaaagttttaagaaacgtttaacggctggatc 471
Query: 301 gtgggaaataacctcgaggaaacttgagaggagatgctaatgagacatcagaggggagat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 470 gtgggaaataacctcgaggaaacttgagaggagatgctaatgagacatcagaggagagat 411
Query: 361 caaatagatgctgacacaggggggagcatctaggccagtgagaattgacagagcccagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 caaatagatgctgacacaggggggagcatctaggccagtgagaattgacagagcccagct 351
Query: 421 accagggaacaatgagagcaaatgaaaagaacagcggtgtgcagctgaccaagttcaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 accagggaacaatgagagcaaatgaaaagaacagcggtgtgcagctgaccaagttcaaat 291
Query: 481 agttcagtaagccatagtaatcaataagaggacatgatgctggaagaatacatcacgacg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agttcagtaagccatagtaatcaataagaggacatgatgctggaagaatacatcacgaca 231
Query: 541 gtgagagagtgaagaaat-cattggacaca 569
|||||||||||||||||| |||||||||||
Sbjct: 230 gtgagagagtgaagaaattcattggacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_c19.g1 MSMg01no339_c19.g1 CHROMAT_FILE:
MSMg01no339_c19.g1 PHD_FILE: MSMg01no339_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:57 2005
(440 letters)
>mm_chr11_81166163_81167002
Length = 840
Score = 758 bits (392), Expect = 0.0
Identities = 430/444 (96%), Gaps = 4/444 (0%)
Strand = Plus / Plus
Query: 1 agatccttggacttgtgttgcaaacactttgcctgcaccactggtgctttctgacctcct 60
|||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 197 agatccttggacttctgttgcaaacactttgcctgccccgctggtgctttctgacctcct 256
Query: 61 tagctttcttctctttgatagattcttctttgctcacattct---t-tcttgtgtttgtc 116
|||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 257 tagctttcttctctttgatagaatcttctttgctcacattctctctctcttgtgtttgtc 316
Query: 117 cgcctggctttgttcccctttccctcacccagcttctcagttctccacccttcctctccc 176
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cgtctggctttggtcccctttccctcacccagcttctcagttctccacccttcctctccc 376
Query: 177 ctgtttcctcctctcttcttttttatttaagaagtcttttagctgtcagctcaggatggc 236
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 377 ctgtttcctcctctcttcttttttatttaagaagtcttttagctgtcagcttaggatggc 436
Query: 237 ctcacattcacaatcctcctgcctcagcctcccaaattgcttgaattatcatgtgtagcg 296
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 437 ctcacattcacaatcctcctgcctcagcctcccaaattgcttgaattatcacgtgtagcg 496
Query: 297 ccatgcccggccattttctcctttctcttactatccgttccttgagcctcactggaatca 356
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccatgcctggccattttctcctttctcttactatccgttccttgagcctcactggaatca 556
Query: 357 gagctctgacaaagcttccctttcgtgtctctgtctgtgaaggacccatggcacagctgc 416
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 557 gagctctgacaaagcttccctttcgtgtctctgtcggtgaaggacccatggcacagctgc 616
Query: 417 atctgccttgtcagaaacctgcca 440
||||||||||||||||||||||||
Sbjct: 617 atctgccttgtcagaaacctgcca 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
