Query= MSMg01no340_g15.b1 MSMg01no340_g15.b1 CHROMAT_FILE:
MSMg01no340_g15.b1 PHD_FILE: MSMg01no340_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:25 2005
(597 letters)
>mm_chr11_82085866_82086862
Length = 997
Score = 1079 bits (558), Expect = 0.0
Identities = 588/598 (98%), Gaps = 2/598 (0%)
Strand = Plus / Plus
Query: 1 atgtatctctgttcaaataaccttacagacagctggagagggtaaaaataagtctcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtatctctgttcaaataaccttacagacagctggagagggtaaaaataagtctcccca 260
Query: 61 aagggcagagaggaggcaagatgtacaatcagaagggcttgacaggccaagaagggacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggcagagaggaggcaagatgtacaatcagaagggcttgacaggccaagaagggacag 320
Query: 121 caccggctagacaagtcagtccaggactgagactcaatgttcccattcactttggcaacc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccggctagacaagtcagtcctggactgagactcaatgttcccattcactttggcaacc 380
Query: 181 cctggctgcttatcgtgccagggaagttgttgacattgaaattgaaattgaaattgagtt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 cctggctgcttatcgtgccagggaagttattgacattgaaattgaaattgaaattgagtt 440
Query: 241 agaagaggggagggaggcccgtgggagccatgcaaatcagggtgagggaaagggagacat 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagaggggagggaggcccgcgggagccatgcaaatcagggtgagggaaagggagacat 500
Query: 301 ccctattctgggaagccctttattacccggttcccagctcctgttaatttataacctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctattctgggaagccctttattacccggttcccagctcctgttaatttataacctgtt 560
Query: 361 gcaaggagttggcctttcatctttcctgacccagagcctcctggggccaatctgcctcct 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gcaaggagttggcctttcatctttcctgacccagaggctcctggggccaatctgcctcct 620
Query: 421 aggcaca-gctctgcttctgcatacctactatgcaccaggcactgtgcatcgtcatcatc 479
||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 621 aggca-acgctctgcttctgcatgcctactatgcaccaggcactgtgcgtcgtcatcatc 679
Query: 480 agtgtcagctcaacctctctcaggcttctaaagcaggaactcctcctgcagccctgacag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtgtcagctcaacctctctcaggcttctaaagcaggaactcctcctgcagccctgacag 739
Query: 540 gtgggtggctagccaataactgagtgatttcaatggcagggagatcactacctgaata 597
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 740 gtgggtggctagccaataactgagggacttcaatggcagggagatcactacctgaata 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_g15.g1 MSMg01no340_g15.g1 CHROMAT_FILE:
MSMg01no340_g15.g1 PHD_FILE: MSMg01no340_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:25 2005
(560 letters)
>mm_chr11_82280823_82281783
Length = 961
Score = 1023 bits (529), Expect = 0.0
Identities = 553/561 (98%), Gaps = 1/561 (0%)
Strand = Plus / Minus
Query: 1 tcccaaactccctggaggatggatggagataggaagggatacaggctgggtattcttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tcccaaactccctggaggatggatggagataggaagggatacaggctgggtattcttttt 702
Query: 61 t-aaaaaagaaaagaaaacgttgtatccattccaagcagcaccctccagaaatactcaac 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 taaaaaaagaaaagaaaacgttgtatccattccaagcagcaccctccagaaatactcaac 642
Query: 120 ccagtgtctctgagatggggctgggctagggtgaggctgggagttaggtattatgttagt 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 641 ccagtgtctctgagatggggctgggctagggtgaggctgggagttgggtattatgttagt 582
Query: 180 gtcttcttagtgttgcctaagggcacagagaggagcagcaatatggctgatgtcacacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gtcttcttagtgttgcctaagggcacagagaggagcagcaatatggctgatgtcacacaa 522
Query: 240 cacgatgcgtcttgtaaaaatgcagcctttgtatggcctcatttacaggcacagagctct 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cacgatgcgtcgtgtaaaaatgcagcctttgtatggcctcatttacaggcacagagctct 462
Query: 300 gggagagaagaggagaaaacatcgtgtaatggatgagaaaatagtcaagtaccagcctaa 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 461 gggagagaagaggagaaaacatcgtgtaatggatgagaacatagtcaagtaccagcctaa 402
Query: 360 gcaaaaggtgtcaacaataagtggtgggttcaaggataagactttgccttccttctctgc 419
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 401 gcaaaaggtgtcaacaataagtggtgggttcaaggttaagactttaccttccttctctgc 342
Query: 420 agggagggggctgctgccgggccttaggtggggactttattctaggactgcttgcgctca 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 341 agggagggggctgctgccgggccttaggtggggactttattctaggacagcttgcgctca 282
Query: 480 agcttgagagcctggagttcagtgatggtacggatgagagactttgctgtcagggctcag 539
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agtttgagagcctggagttcagtgatggtacggatgagagactttgctgtcagggctcag 222
Query: 540 gcagggacgcctcagcccact 560
|||||||||||||||||||||
Sbjct: 221 gcagggacgcctcagcccact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 961
Length adjustment: 10
Effective length of query: 550
Effective length of database: 951
Effective search space: 523050
Effective search space used: 523050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
