Query= MSMg01no340_p02.b1 MSMg01no340_p02.b1 CHROMAT_FILE:
MSMg01no340_p02.b1 PHD_FILE: MSMg01no340_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:03 2005
(639 letters)
>mm_chr11_108011283_108012322
Length = 1040
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggccagcaaacttttggaagtatctgtggcagcttgaatgctgctatttaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ggaattccaggccagcaaacttttggaagtatctgtggcagcttgaatgctgctatttaa 781
Query: 64 ggcctgatgaagaggcagcttggagaaaaacctcaaaaataaatactctgattcatcatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggcctgatgaagaggcagcttggagaaaaacctcaaaaataaatactctgattcatcatt 721
Query: 124 gttgttcaagctttccagccatcagagccagccctgggctccagagacaaagggtaacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gttgttcaagctttccagccatcagagccagccctgggctccagagacaaagggtaacat 661
Query: 184 tcaccaggagctgttcagcccagtcaggagccctggcagcggtgaggaggcggacaggga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcaccaggagctgttcagcccagtcaggagccctggcagcggtgaggaggcggacaggga 601
Query: 244 ggcagctttctgcaaaacccggctcgggttgggccggtgtggaaggaaggctagaacaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggcagctttctgcaaaacccggctcgggttgggccggtgtggaaggaaggctagaacaag 541
Query: 304 acagccgtgccgctagggttttgctcagtggaggaggaatgaatcagccagagatggagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acagccgtgccgctagggttttgctcagtggaggaggaatgaatcagccagagatggagg 481
Query: 364 tcctcccagaatagtggaccatgttataatagccccaggcgggcagtggattgggtagct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcctcccagaatagtggaccatgttataatagccccaggcgggcagtggattgggtagct 421
Query: 424 ggcagcagttagtggggcttcttcagtgtcaagcagccaatgacaaagttctctgctgtc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggcagcagttagtggggcttcttcagtgtcaagcagccaatgacaaagttctctgctgtc 361
Query: 484 tgcagctatgtagtgcaaggctggtggcgctggaaagtaggagtctggcatttgcagatg 543
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 360 tgcagctatgtagtgcaaggctggtggcgcgggaaagtaggagtctggcatttgcagatg 301
Query: 544 gctgacactgagatggaacagggg-ttagactgtgtgtggcctcctcagctgctctagct 602
|||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||
Sbjct: 300 gctgacactgggatggaacagggggttagactgtgtgtgaccttctcagctgctctagct 241
Query: 603 tcgggtcccttactcctctgcatcctcatctgctgga 639
|||||||||||||||||||||||||||||||||||||
Sbjct: 240 tcgggtcccttactcctctgcatcctcatctgctgga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_p02.g1 MSMg01no340_p02.g1 CHROMAT_FILE:
MSMg01no340_p02.g1 PHD_FILE: MSMg01no340_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:03 2005
(584 letters)
>mm_chr11_107828543_107829530
Length = 988
Score = 1079 bits (558), Expect = 0.0
Identities = 579/588 (98%), Gaps = 4/588 (0%)
Strand = Plus / Plus
Query: 1 agcagtggtcctggagtccccacagggaggctctgttcacactgagatgggcttacggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagtggtcctggagtccccacagggaggctctgttcacactgagatgggcttacggga 260
Query: 61 ggtaactgtaaatcccacggtgcctgacttcagaaatgagaaccaggtatgtgggagaaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaactgtaaaacccacggtgcctgacttcagaaatgagaaccaggtatgtgggagaaa 320
Query: 121 ggtattc----ggggcagtagagtcaaccaggctcaagggaggagcgaggagacactccc 176
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtattcattcggggcagtagagtcaaccaggctcaagggaggagcgaggagacactccc 380
Query: 177 tcaggagaggcagcccttgaaactgcctgaacgctctggaatggcattcaaatcaacatc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaggagaggcagcccttgaaactgcctgaacgctctggaatggcattcaaatcaacatc 440
Query: 237 aaccctttctattcagtggacaaacactagctaatgacatatcagatactacttatgtaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccctttctattcagtggacaaacactagctaatgacatatcagatactacttatgtaa 500
Query: 297 aatctgccttcaagtaattggatgagtttgtgttatggggaccctcccactccctttttc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatctgccttcaagtaattggatgagtttgtgttatggggaccctcccactccctttttc 560
Query: 357 tccatctatcaccgtatacggctgacaggccacgtcttggggtgggcattctgctagaca 416
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccatctatcaccgtttacggctgacaggccacgtcttggggtgggcattctgctagaca 620
Query: 417 accagggctaatggctctgactgtggaggtggatatgaaatgagtacttggaaatgtaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accagggctaatggctctgactgtggaggtggatatgaaatgagtacttggaaatgtaat 680
Query: 477 atctacaatcgcagatattagaacatcacataagaaatatctgtaacatttgaaatctcc 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctacaatcgcagatattagaacatcacataagaaatatctgtaacatttgaaatctcc 740
Query: 537 agaaaaagtgcattgtgtgaggacaatgaatatgatcagagtcagaag 584
|||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaagaagcgcattgtgtgaggacaatgaatatgatcagagtcagaag 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 988
Length adjustment: 10
Effective length of query: 574
Effective length of database: 978
Effective search space: 561372
Effective search space used: 561372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
