Query= MSMg01no341_d03.b1 MSMg01no341_d03.b1 CHROMAT_FILE:
MSMg01no341_d03.b1 PHD_FILE: MSMg01no341_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:23 2005
(451 letters)
>mm_chr11_60115164_60116014
Length = 851
Score = 803 bits (415), Expect = 0.0
Identities = 441/451 (97%), Gaps = 4/451 (0%)
Strand = Plus / Plus
Query: 3 ggaattcttcctttccag--ctactcacacccacaggaaccattcaggaaaagcattcct 60
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcttcctt--cagagctactcacacccacaggaaccattcaggaaaagcattcct 260
Query: 61 tggtggtaatcagagaacaatgcttccagttctgattcacaaagtgctgcctgcactgtg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtggtaatcagagaacaatgcctccagttctgattcacaaagtgctgcctgcactgtg 320
Query: 121 ggcaacacaaagccaggcagacttcctgtccagacccgcaagcaaatgagtctcactgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaacacaaagccaggcagacttcctgtccagacccgcaagcaaatgagtctcactgct 380
Query: 181 gtggctcctgatacttaactccccaggcacagctggagaacaggcctctcctcagcccga 240
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 381 gtggctcctgatacttaactccccaggtacagctggggaacaggcctcccctcagcccga 440
Query: 241 cactgtgctgagaagtaaggacaggagggcagccaggaccatggccactcctagctctgt 300
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgtggtgagaagtaagggcaggagggcagccaggaccatggccactcctagctctgt 500
Query: 301 gcagggagggtgttagatcacactggagcttcaggggctcctgagggcaacagcagggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagggagggtgttagatcacactggagcttcaggggctcctgagggcaacagcagggac 560
Query: 361 agtccagggccttccggtggggtatcacctgttcttagctacccagatgccgccccatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtccagggccttccggtggggtatcacctgttcttagctacccagatgccgccccatcc 620
Query: 421 ctcctgcctacaggtgctttgagtaacaggc 451
|||||||||||||||||||||||||||||||
Sbjct: 621 ctcctgcctacaggtgctttgagtaacaggc 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_d03.g1 MSMg01no341_d03.g1 CHROMAT_FILE:
MSMg01no341_d03.g1 PHD_FILE: MSMg01no341_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:23 2005
(451 letters)
>mm_chr11_60286309_60287159
Length = 851
Score = 775 bits (401), Expect = 0.0
Identities = 407/409 (99%)
Strand = Plus / Minus
Query: 1 attctgtagaccaggctggcatcaaactcagagaacccttacagcctgatactgttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 attctgtagaccaggctggcatcaaactcagagaacccttacagcctgatactgttcaag 350
Query: 61 gtttcctactaaaagccccctactcaagcaactaaggctattaggcaactggggcaactt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 349 gtttcctactaaaagccccctactcaagcaactaaggctatcaggcaactggggcaactt 290
Query: 121 gtgaactgacagctacaaatgttaattttgataggctagctataatgttgcactttgatg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtgtactgacagctacaaatgttaattttgataggctagctataatgttgcactttgatg 230
Query: 181 tccagcattccagaggcagaggctgaagagtctcagtgagttccaggtcagcctggttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tccagcattccagaggcagaggctgaagagtctcagtgagttccaggtcagcctggttta 170
Query: 241 cttagcaagctccagaacagccagccagactatatagagaatgttaaccttgtttctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cttagcaagctccagaacagccagccagactatatagagaatgttaaccttgtttctaat 110
Query: 301 attggggctccactctctgcctaatttaagacctaggatgaacttatatagtaaccagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 attggggctccactctctgcctaatttaagacctaggatgaacttatatagtaaccagtg 50
Query: 361 gggatgccagttatttaaaggagtagttgtttgcctctgccttgacaat 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gggatgccagttatttaaaggagtagttgtttgcctctgccttgacaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
