Query= MSMg01no341_e22.b1 MSMg01no341_e22.b1 CHROMAT_FILE:
MSMg01no341_e22.b1 PHD_FILE: MSMg01no341_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:31 2005
(446 letters)
>mm_chr6_67686165_67687010
Length = 846
Score = 768 bits (397), Expect = 0.0
Identities = 435/451 (96%), Gaps = 10/451 (2%)
Strand = Plus / Plus
Query: 5 gaattctacacccctacggccc-tttaccccattaaaccccctagcttttaagc-t-a-- 59
||||||||||| |||| ||||| |||||||||||||||||||||||||| |||| | |
Sbjct: 197 gaattctacactccta-ggcccctttaccccattaaaccccctagctttcaagcctcatg 255
Query: 60 ----acatccattgtctcctgtgcgggatgcatgttggtctggagctccgtcattaaact 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtcgacatccattgtctcctgtgcgggatgcatgttggtctggagctccgtcattaaact 315
Query: 116 gcctcatgtgattacagcaaattggattctcctgtttctttgggtgctctctcactcctg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcctcatgtgattacagcaaattggattctcctgtttctttgggtgctctctcactcctg 375
Query: 176 agactagagtgggggtacccgaaagggggttcttacattagcacattttcatttacaggc 235
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 376 agactagagtgggggtacccgaaaggggtttcttacattagcacattttcatttacaggc 435
Query: 236 tattatttgattaagttctggattttaagtattgtaatttttgctacagtaaataatcaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tattatttgattaagttctggattttaagtattgtaatttttgctacagtaaataatcaa 495
Query: 296 tttcatgtattttaactcattctctacacatccactctcttggaacattttatggaatta 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tttcatgtattttaactcattctctacacatccactctcttggaacattttatggaatta 555
Query: 356 attaattatactctgtatcaaatcattatgaatatacaatttcatgtataattgggtttg 415
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 556 attaattatactctgtatcaaatcattatgaatatacaatttcatgtagaattgggtttg 615
Query: 416 ctcttgatgtgctttcctttaagttttctac 446
|||||||||| |||||||||||||||||||
Sbjct: 616 ttcttgatgtgttttcctttaagttttctac 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_e22.g1 MSMg01no341_e22.g1 CHROMAT_FILE:
MSMg01no341_e22.g1 PHD_FILE: MSMg01no341_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:31 2005
(372 letters)
>mm_chr11_19962479_19963252
Length = 774
Score = 592 bits (306), Expect = e-173
Identities = 357/374 (95%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 1 ctaagcgttcctaaatcatgttgtcaaattctccaatctcaggagttctgggcccattac 60
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 530 ctaagcgttcctaaatcatgttgtcaaattctccagtctcgggagttctgggcccattac 471
Query: 61 ctgctgtgcataggactggtaccaaggactattgagtgtagacaaacaatcaactcttgg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 470 ctgctgtgcataggactggtaccaaggactattgagtgtagacaaacgatcaactcttgg 411
Query: 121 c-ttgaccatggctttatac-aaggggtgaaaacaagcaagaataggatggaatctggaa 178
| ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct: 410 ctttgaccatggctttaaacaaaggggtgaaaacaagaaagaataggatggaatctggaa 351
Query: 179 taaaacagtgaaagagcactgttctttgtacctggactgtagaatttgtttttatctcat 238
|||||||||||||||||| |||||||||||||| || |||||||||||||||||| ||||
Sbjct: 350 taaaacagtgaaagagcattgttctttgtaccttgaatgtagaatttgtttttatttcat 291
Query: 239 aattctgctagcaaacatgactgttaaaatgatgtatttatatatgtaataatttagaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aattctgctagcaaacatgactgttaaaatgatgtatttatatatgtaataatttagaaa 231
Query: 299 ttccgttttatagtctccgattctaaggtgaaataataaatttaataatttgggagttcg 358
|||| ||||||||| ||| || ||||||||||||||| |||||| |||||||||||||||
Sbjct: 230 ttccattttatagtttcctatcctaaggtgaaataatgaatttagtaatttgggagttcg 171
Query: 359 gacatactgtattc 372
||||||||||||||
Sbjct: 170 gacatactgtattc 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 774
Length adjustment: 9
Effective length of query: 363
Effective length of database: 765
Effective search space: 277695
Effective search space used: 277695
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
