Query= MSMg01no341_e24.b1 MSMg01no341_e24.b1 CHROMAT_FILE:
MSMg01no341_e24.b1 PHD_FILE: MSMg01no341_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:31 2005
(302 letters)
>mm_chr11_109290672_109291373
Length = 702
Score = 528 bits (273), Expect = e-154
Identities = 291/297 (97%)
Strand = Plus / Plus
Query: 6 gaattctgtttctaatgccagacagtttatggactaaggggtagactgtttctgtcattt 65
||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||
Sbjct: 206 gaattctgtttctaatgccagacagcttatggactaaggggtagaatggttctgtcattt 265
Query: 66 tacagcctgccttcatttcctccctctcccccatatcataggctctctaggcaacaccag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tacagcctgccttcatttcctccctctcccccatatcataggctctctaggcaacaccag 325
Query: 126 agtcatcagtgaagagtatattaaatggctcaagggctactgtgaagcatttttttacgg 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 326 agtcatcagtgaagagtatattaaatggctcaagggctactgtgaagcatttttctacgg 385
Query: 186 tttgaaggtgaagttcttagaacctgtttcggtctctgaaaccaagtgttcctttagagt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tttgaaggtgaagttcttagaacctgtttcggtctctgaaaccaagtgttcctttagagt 445
Query: 246 gaatgagcacacacaaaacctgtaaatccacacaggctagtgaggagcctttgcaac 302
|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 446 gaatgagcacacacaaaacctgcaaatccacacaggcaagtgaggagcctttgcaac 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_e24.g1 MSMg01no341_e24.g1 CHROMAT_FILE:
MSMg01no341_e24.g1 PHD_FILE: MSMg01no341_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:32 2005
(309 letters)
>mm_chr11_109469638_109470346
Length = 709
Score = 557 bits (288), Expect = e-163
Identities = 300/304 (98%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 1 cttaatatggagttatttctggtcatagaacaatcatttaaaacaaaggagtgatcgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttaatatggagttatttctggtcatagaacaatcatttaaaacaaaggagtgatcgcca 445
Query: 61 cgccctcttgtcacaaattggacccttctgagggtagcaccttgggaggaatcctaggta 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgcccttttgtcacaaattggacccttctgagggtagcaccttgggaggaatcctaggta 385
Query: 121 ctactgaggcaaaagcgaaaagaccactgtaacccacaaccccagaggcagtacgagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctactgaggcaaaagcgaaaagaccactgtaacccacaaccccagaggcagtacgagtaa 325
Query: 181 cagaaactctttcacaagcattaaatgaagaaacccatttgttctgagatcaggactcgc 240
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 324 cagaaactctttcacaagcattaaatgaagaaacccatttgttccgagatcaggactcac 265
Query: 241 acctgaaaatgatggttttgaacttacttattaccgtgtgtacgcacacaggacaggggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 acctgaaaatgatggttttgaacttacttattaccgtgtgtacgcacacaggac-ggggg 206
Query: 301 gggg 304
||||
Sbjct: 205 gggg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
