Query= MSMg01no341_i17.b1 MSMg01no341_i17.b1 CHROMAT_FILE:
MSMg01no341_i17.b1 PHD_FILE: MSMg01no341_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:50 2005
(480 letters)
>mm_chr11_85005395_85006274
Length = 880
Score = 907 bits (469), Expect = 0.0
Identities = 472/473 (99%)
Strand = Plus / Minus
Query: 8 ttccaaaacaggccgggctacacataaagattctacaaatctttcatgttatttaaaaat 67
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ttccaaaacaggcagggctacacataaagattctacaaatctttcatgttatttaaaaat 571
Query: 68 atctttaaaaacattagtcctaaacctgaactttggactggtaggtggctcatcacccta 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atctttaaaaacattagtcctaaacctgaactttggactggtaggtggctcatcacccta 511
Query: 128 gatgacttgaagtctttcttgagaagtctcatgataggagggaaggagacgcctgaaagg 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gatgacttgaagtctttcttgagaagtctcatgataggagggaaggagacgcctgaaagg 451
Query: 188 caggatccccaggcctccacacatgcagtagcttgagtgtgtgagtacacagaaacacac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 caggatccccaggcctccacacatgcagtagcttgagtgtgtgagtacacagaaacacac 391
Query: 248 atgtaaaataagtacaacctttttttaaaccggtgaaatttagcgttctagtaaagccag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atgtaaaataagtacaacctttttttaaaccggtgaaatttagcgttctagtaaagccag 331
Query: 308 ttccttgaagtctttagagacattgcagggatgaaagtaggtaagagcagtgatagaggg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttccttgaagtctttagagacattgcagggatgaaagtaggtaagagcagtgatagaggg 271
Query: 368 actgcacctctttccttccataggactaaaaccaagtcagcctactgaaagaggagaacc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 actgcacctctttccttccataggactaaaaccaagtcagcctactgaaagaggagaacc 211
Query: 428 tgggccaggggtgatggctcatgcctttaatcccagcacttgggaggcagagg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tgggccaggggtgatggctcatgcctttaatcccagcacttgggaggcagagg 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_i17.g1 MSMg01no341_i17.g1 CHROMAT_FILE:
MSMg01no341_i17.g1 PHD_FILE: MSMg01no341_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:50 2005
(385 letters)
>mm_chr11_84800654_84801439
Length = 786
Score = 435 bits (225), Expect = e-126
Identities = 228/229 (99%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 1 ctgaatggcactaaagaaagaagagagtggtggtgtgttagtaattaacagtactccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaatggcactaaagaaagaagagagtggtggtgtgttagtaattaacagtactccagc 260
Query: 61 caaggcacagtgctaagatctaagcaagatgaccacctaggtagtaaggaaaaaa-tgtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 caaggcacagtgctaagatctaagcaagatgaccacctaggtagtaaggaaaaaaatgtt 320
Query: 120 taccatcacctaatttttcaaaaaataaattctatttcaaatatctgtgtgaaattttct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccatcacctaatttttcaaaaaataaattctatttcaaatatctgtgtgaaattttct 380
Query: 180 ttttaaaaagacagttatcttgctatgtagtctaggttggcctaaactt 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttaaaaagacagttatcttgctatgtagtctaggttggcctaaactt 429
Score = 296 bits (153), Expect = 2e-84
Identities = 156/157 (99%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 217 tggcctaaacttgagatttgtaagtagtaaggttagaggcatgtgtcaccaggtctggtc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tggcctaaacttgagatttgtaagtagtaaggttagaggcatgtgtcaccaggtctggtc 690
Query: 277 ctgtaatagttatttagaaagaaaaacatcccttagtaacaagttaacacttaatatagg 336
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 691 ctgtaatagttatttagaaagaaaaacatcccttagtaacaagt-aacacttaatatagg 749
Query: 337 attatttgaatctctgactcaaattatactaattaca 373
|||||||||||||||||||||||||||||||||||||
Sbjct: 750 attatttgaatctctgactcaaattatactaattaca 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 385
Length of database: 786
Length adjustment: 9
Effective length of query: 376
Effective length of database: 777
Effective search space: 292152
Effective search space used: 292152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
