Query= MSMg01no342_b24.b1 MSMg01no342_b24.b1 CHROMAT_FILE:
MSMg01no342_b24.b1 PHD_FILE: MSMg01no342_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:33 2005
(452 letters)
>mm_chr11_86081699_86082550
Length = 852
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%), Gaps = 2/453 (0%)
Strand = Plus / Plus
Query: 1 tgcaaatttgttttacctactcaaataaaacgattaatgtactgtgacagtacattgata 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaaatttg-tttacctactcaaataaaacgattaatgtactgtgacagtacattgata 259
Query: 61 agttagatctatcatcctgcacgaaaggcttcacttcttcttctaatggctatttagtta 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agttagatctatcatcctgcatgaaaggcttcacttcttcttctaatggctatttagtta 319
Query: 121 cctcctatttgagcaaaatctgatgtgtaaaggggagaaaaaaaggaaagg-aaaaaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 320 cctcctatttgagcaaaatctgatgtgtaaaggggagaaaaaaaggaaaggaaaaaaaaa 379
Query: 180 aaaagcaaaccatgactcaatcctgtatatttgggactagttcctgattcccaggtaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 380 aaaagcaaaccatgactcaatcctgtatatttgggactagttcctgattcctaggtaaga 439
Query: 240 agaattgtatgctgggtccctgcttatggctacatggaagaaaatgtcagggaataatct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaattgtatgctgggtccctgcttatggctacatggaagaaaatgtcagggaataatct 499
Query: 300 tgttaaatctatttcaaactgaggtatggttgtcacacattagtaattttaaactgagat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgttaaatctatttcaaactgaggtatggttgtcacacattagtaattttaaactgagat 559
Query: 360 tataatcttttatttttcttgagtaattattgagctaagaaaataacaaggatagttctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tataatcttttatttttcttgagtaattattgagctaagaaaataacaaggatagttctt 619
Query: 420 aatagaaattccaaataagcatcttttttcctc 452
|||||||||||||||||||||||||||||||||
Sbjct: 620 aatagaaattccaaataagcatcttttttcctc 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_b24.g1 MSMg01no342_b24.g1 CHROMAT_FILE:
MSMg01no342_b24.g1 PHD_FILE: MSMg01no342_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:33 2005
(479 letters)
>mm_chr11_86258206_86259084
Length = 879
Score = 911 bits (471), Expect = 0.0
Identities = 477/479 (99%)
Strand = Plus / Minus
Query: 1 atcctgcagtgtgtggctcggtggaaacgatcgcacctctaattgcagagaaccataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 679 atcctgcagtgtgtggctcggtggaaacgatcgcacctctaattgcagagacccataact 620
Query: 61 gtggtgtaaaacagcgtctatgagcactggcgagcgatccagagaggcctgtggcttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtggtgtaaaacagcgtctatgagcactggcgagcgatccagagaggcctgtggcttacc 560
Query: 121 tacagtaaggttctcttgatagaagtctctaaaacgctggtgtttgcacttgaacacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tacagtaaggttctcttgatagaagtctctaaaacgctggtgtttgcacttgaacacact 500
Query: 181 gaaggattgggcaagcaaggtgctttatatagcctggggtggttctgtcaccaagcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gaaggattgggcaagcaaggtgctttatatagcctggggtggttctgtcaccaagcttct 440
Query: 241 ctttcacatctgtccctgcgttttcattcttggtgctactgtcggattttggagccatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctttcacatctgtccctgcgttttcattcttggtgctactgtcggattttggagccatct 380
Query: 301 gccttctcccacggtccacaagaaccatcttttcactgccctctcttcctcagagggtcc 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtcttctcccacggtccacaagaaccatcttttcactgccctctcttcctcagagggtcc 320
Query: 361 atccccctttctggtttctttgcacagagctctagacgaatggtcctgcagttctaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atccccctttctggtttctttgcacagagctctagacgaatggtcctgcagttctaactg 260
Query: 421 ttcctcagaccccctgaaatgaaatccaatctcctcagataaacacacaaaaccctcca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttcctcagaccccctgaaatgaaatccaatctcctcagataaacacacaaaaccctcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
