GGCGCTATACGACTCCTATAGTCAGAGAATGCGCGGAATTCAGTGAATTT
ACGAGACGAGGGTGGAAACTGGAAAGAGTGGAGGGAGAAGAAACTGTGGT
CAGGATATATTGTATGAGAGAAGAATCAATTTCAATTAAAAATATTTTTA
AAAAAAGAAAAGAAAAGGTGTATTTGAATTCAGAAAACAACTGCCAAACC
AAACTATGATACCTAGCAAAACTATCTTTCATAGTGGCAGAACAAGACTC
TCCATAATAAAACAAGATAATAAACTAATAATCATTATATAATATCTATA
GACATATTTTATTGAACCCTTCGTATGTAGTGTAAACATATCACTAAGAC
TACAAGAAAAACTGTATCAAGCTAATCAATATTTAAAAATGAGGGTTAAG
AAAACAGTGAATACTGCAAAATATGGTAGATATTAATAAATGTTTTAGTC
TTAATTCTGAATATTAATGTTGTCAATTCCTAATGAAATGACACTGATTT
ATAGAATGGATTAACAAAAAGAAACTGTGACTTGGGTGGCTCCAAAAGAT
TTTTTATTTTCTAAAGCAGAAGGTAAAAGGAAGAAAATCCGTGGTTCCAC
GAAATAAAATGCTGGAACTATTCAAAAACTAAATTTTTGAATAATTCGAT
TAACTTTTAACCTCCACCCTATAACAAAAAGGAAAAAAAAATGGCCTTTT
TTTAATTTATGTAAGCCAACATACCCCGGAGTGAATTTTATAACCTCTTA
ATAAAATATA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCCAGCCCCTCATTTTATTTTCTGGGTAAATAAAACTT
TAAAAAAAATGTTGCAGGGCGAGAGTACTCTACTTCTCCCTTCATTAAAG
AAGCTTCTATTGGCAGCAGCTGGAGGTCATCATAGACAGCCTCAACTGGC
CAAATGGAAAGCACAACCCCTACACCTTAGGGGTTCTTAGGCTTAAAGAA
CATTGTAGAAGAGGGACAGAAAATATTGTAAAACCTAGAGTACAATGGCA
TCTGCTGAGAGTGCTAATATCTTAGGCACACACACACACACACACACAGT
GGAGAATGGTAGGGAAGAGAAGTTGGATCTGGGAGGAGTTGNNNNNNNNN
NNNNNNNNNNNNTNTNTTNNNNNTTTTTTTTNNNTTTTNTTTTTTTTTTT
TTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTNTTTN
NTTTTNNNTNTTTTTTTTTTTNTTTNTTTTTTTTTTTTTTTTTTTTTTTT
TTNTTNTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTT
TTNTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTNTTTTTTTTTNTTTTTTTTTTTTNTNTTTNTTTTTTNNNT
NNTNNNNTNTTTTTTTTTTTTTTTTT

Query= MSMg01no342_i21.b1 MSMg01no342_i21.b1 CHROMAT_FILE:
MSMg01no342_i21.b1 PHD_FILE: MSMg01no342_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:06 2005
         (469 letters)



>mm_chr11_18126935_18127803
          Length = 869

 Score =  880 bits (455), Expect = 0.0
 Identities = 464/467 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   tggaaactggaaagagtggagggagaagaaactgtggtcaggatatattgtatgagagaa 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tggaaactggaaagagtggagggagaagaaactgtggtcaggatatattgtatgagagaa 810

                                                                       
Query: 63  gaatcaatttcaattaaaaatatttttaaaaaaagaaaagaaaaggtgtatttgaattca 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaatcaatttcaattaaaaatatttttaaaaaaagaaaagaaaaggtgtatttgaattca 750

                                                                       
Query: 123 gaaaacaactgccaaaccaaactatgatacctagcaaaactatctttcatagtggcagaa 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gaaaacaactgccaaaccaaactatgatacctagcaaaactatctttcatagtggcagaa 690

                                                                       
Query: 183 caagactctccataataaaacaagataataaactaataatcattatataatatctataga 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 caagactctccataataaaacaagataataaactaataatcattatataatatctataga 630

                                                                       
Query: 243 catattttattgaacccttcgtatgtagtgtaaacatatcactaagactacaagaaaaac 302
           ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 catatttgaaagaacccttcgtatgtagtgtaaacatatcactaagactacaagaaaaac 570

                                                                       
Query: 303 tgtatcaagctaatcaatatttaaaaatgagggttaagaaaacagtgaatactgcaaaat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgtatcaagctaatcaatatttaaaaatgagggttaagaaaacagtgaatactgcaaaat 510

                                                                       
Query: 363 atggtagatattaataaatgttttagtcttaattctgaatattaatgttgtcaattccta 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atggtagatattaataaatgttttagtcttaattctgaatattaatgttgtcaattccta 450

                                                          
Query: 423 atgaaatgacactgatttatagaatggattaacaaaaagaaactgtg 469
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atgaaatgacactgatttatagaatggattaacaaaaagaaactgtg 403


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)