MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-344B23
Chromosome	11 (Build37)
Map Location	11,847,784 - 11,847,977
singlet/doublet	singlet
Overlap gene	Grb10
Upstream gene	Vwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc
Downstream gene	Cobl, LOC627244
Link	Open Mouse BAC browser

Click to get alignment info.

name	Vwc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319922 MGI:2442987
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zpbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53604 MGI:1855701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625132 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625132
definition	note : TGF beta-inducible nuclear protein 1 pseudogene pseudo : _no_value

name	EG432534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432534 MGI:3645014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4930415F15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73862 MGI:1921112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Ikzf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22778 MGI:1342540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fignl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60530 MGI:1890648
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13195 MGI:94876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14783 MGI:103232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cobl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12808 MGI:105056
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 61 Proteins pseudo : _no_value

name	Vwc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342639 GeneID:319922 MGI:2442987
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : von Willebrand factor C domain containing 2 transcript_id : NM_177033.2

name	Zpbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657604 GeneID:53604 MGI:1855701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zona pellucida binding protein transcript_id : NM_015785.1

name	4930415F15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389905 GeneID:73862 MGI:1921112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 4930415F15 gene transcript_id : XM_203398.3

name	Ikzf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71037386 GeneID:22778 MGI:1342540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IKAROS family zinc finger 1 transcript_id : NM_001025597.1

name	Ikzf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71037384 GeneID:22778 MGI:1342540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IKAROS family zinc finger 1 transcript_id : NM_009578.2

name	Fignl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560299 GeneID:60530 MGI:1890648
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fidgetin-like 1 transcript_id : NM_021891.2

name	Ddc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348104 GeneID:13195 MGI:94876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopa decarboxylase transcript_id : NM_016672.3

name	Grb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129993 GeneID:14783 MGI:103232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth factor receptor bound protein 10 transcript_id : NM_010345.3

name	Cobl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32441275 GeneID:12808 MGI:105056
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cordon-bleu transcript_id : NM_172496.2

name	Vwc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892913 GeneID:319922 MGI:2442987
definition	codon_start : 1 note : novel von Willebrand factor type C domain containing protein product : von Willebrand factor C domain containing 2 protein_id : NP_796007.1

name	Zpbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657605 CCDS:CCDS24434.1 GeneID:53604 MGI:1855701
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007339 - binding of sperm to zona pellucida [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : zona pellucida binding protein protein_id : NP_056600.1

name	4930415F15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25025760 GeneID:73862 MGI:1921112
definition	codon_start : 1 product : hypothetical protein LOC73862 protein_id : XP_203398.1

name	Ikzf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71037387 CCDS:CCDS24436.1 GeneID:22778 MGI:1342540
definition	GO_component : GO:0005721 - centric heterochromatin [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence TAS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030900 - forebrain development [Evidence IMP]; GO:0048732 - gland development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0040018 - positive regulation of body size [Evidence IMP] [Evidence IGI]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; zinc finger protein subfamily 1A, 1; zinc finger protein, subfamily 1A, 1 (Ikaros) product : zinc finger protein subfamily 1A, 1 isoform a protein_id : NP_001020768.1

name	Ikzf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71037385 CCDS:CCDS24437.1 GeneID:22778 MGI:1342540
definition	GO_component : GO:0005721 - centric heterochromatin [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence TAS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030900 - forebrain development [Evidence IMP]; GO:0048732 - gland development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0040018 - positive regulation of body size [Evidence IMP] [Evidence IGI]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; zinc finger protein subfamily 1A, 1; zinc finger protein, subfamily 1A, 1 (Ikaros) product : zinc finger protein subfamily 1A, 1 isoform b protein_id : NP_033604.2

name	Fignl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560300 CCDS:CCDS24438.1 GeneID:60530 MGI:1890648
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] codon_start : 1 product : fidgetin-like 1 protein_id : NP_068691.2

name	Ddc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22094149 CCDS:CCDS24439.1 GeneID:13195 MGI:94876
definition	GO_function : GO:0004058 - aromatic-L-amino-acid decarboxylase activity [Evidence IEA]; GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0006519 - amino acid and derivative metabolism [Evidence IEA]; GO:0019752 - carboxylic acid metabolism [Evidence IEA]; GO:0042423 - catecholamine biosynthesis [Evidence IEA] codon_start : 1 note : aromatic L-amino acid decarboxylase product : dopa decarboxylase protein_id : NP_057881.1

name	Grb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909311 CCDS:CCDS24440.1 GeneID:14783 MGI:103232
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005070 - SH3/SH2 adaptor activity [Evidence IPI] GO_process : GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence IPI]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : maternally expressed gene 1 product : growth factor receptor bound protein 10 protein_id : NP_034475.2

name	Cobl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441276 GeneID:12808 MGI:105056
definition	GO_process : GO:0001843 - neural tube closure [Evidence IGI] codon_start : 1 exception : mismatches in translation product : cordon-bleu protein protein_id : NP_766084.2

name	EG432534 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261656 GeneID:432534 MGI:3645014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432534 transcript_id : XR_035368.1

name	LOC627244 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261658 GeneID:627244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 61 Proteins product : similar to actin pseudo : _no_value transcript_id : XR_034050.1

clone name	MSMg01-372F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433I11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-451P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351G24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-494D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463E17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136L06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-046I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-395D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-428D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327B08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056F15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-106O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-344B23.T7 (MSMg01no344_b23.b1)	MSMg01-344B23.TJ (MSMg01no344_b23.g1)
ACC	AG457263	AG457264
length	767	703
length of high quality (start - end)	446 (66 - 511)	194 (77 - 270)
definition	CHROMAT_FILE: MSMg01no344_b23.b1 PHD_FILE: MSMg01no344_b23.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:34:12 2005	CHROMAT_FILE: MSMg01no344_b23.g1 PHD_FILE: MSMg01no344_b23.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:34:12 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAG GCCCATTCCCAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAAC ATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGAC TAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAG TATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATT GGAAAGGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATA TATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACA GCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCC TTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAAC ACCCTTCTCAATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTAA CTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAA GAATTTAAAGAAGACTTTCCAGAAGGAAAGAACTCCCCTGCCCTTGGATT GGGCGGAACCAAAATGGAAAAAAGGGTATTCTTGGCCAAAGGAATCCTAA AATTCCTGGTGGTCCCCCCCAAAATTCCAACTCATTCTTCTAGGGAATAA AAAGAAAAATTTTTGACTTCCCCGGGGGAATACAAAACCCCTGCGTATGG TACTCCTCTCTCCCCCG	NNCCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGATAGAAGTAAATGGAAAC TATTCTAGGTTTGCATCAAGCATGGCTTTTTACGCCCTATGAGATTTGTA ACTGCCAGTGGGAACAGATCTTGCTTTTAAATATGTTTCTGCCAAGATGT CCCCTTCTCGCAGTATCAAAATGGAAGCTAAGATGTGTTGGCTCAGAAAC TGCTCTTGGGAACGGTCCTCGCAGAGCAGTGCCTGTAGCCACAGTTCTCC TTTGTAACCCTGAAATCTCTCTACCAATCCTGTGACCTTTTAAAGTGGCT TTTTCCTAAGGGTCCTCCTTTCCTTCAAGATGAAAATTTTTCCAAAAATT CAGCCCCGGGTTTCCTGGAAAATAATAAGGGACCCCCAAAAAAAAAAAAG CCCCTGGTTCATTTAACTGTGGAAAGGCTAAATTGGGATTCGGGGCCCCA TTTGAACCCCGGGGGGGGACTTTTGCAAAAAAATTTTATCCCGGGGTTTT GGGGGGGGGGAAAATTTTTGGTCCCCCACCCCCCCCCCCCATTGGGTTTT TTTTCAAAAAATTTTTGTGAAAAAAAAACCCTCTTTTTTTTTTTTTTTTT NAAAAAAAAAAGGGGTGTTTTTTTCCCCCCGTAAAATAAAACCGGGGGGG GGG
quality values	Open. Hide. 24 25 25 25 25 11 11 11 15 16 13 8 8 8 25 23 59 31 31 31 31 30 21 27 11 9 9 9 17 9 9 9 9 10 10 11 13 18 18 30 30 30 30 31 31 41 33 33 33 33 27 23 9 11 11 11 14 14 14 13 12 10 19 15 21 22 22 28 28 30 37 39 57 57 57 50 53 53 57 53 53 53 53 50 50 57 59 57 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 68 68 68 68 68 57 50 47 57 57 57 57 57 48 57 57 59 57 57 57 57 57 57 68 68 68 57 57 57 57 57 57 57 57 57 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 54 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 44 42 32 32 27 27 28 20 17 18 28 38 43 57 57 68 68 68 68 68 68 68 68 68 68 57 57 50 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 48 48 57 57 57 57 68 68 68 68 68 68 68 68 68 68 59 59 57 48 48 57 57 68 57 57 57 57 57 48 48 57 46 57 57 59 59 59 59 59 59 57 57 57 57 48 43 43 43 43 47 47 43 53 57 59 57 59 59 59 59 59 59 41 37 37 37 37 37 17 18 19 18 19 19 29 36 39 31 36 41 41 31 31 41 41 32 36 39 41 47 37 37 41 31 31 37 37 37 37 30 31 31 28 28 41 43 47 47 47 43 18 9 9 9 9 14 16 33 37 37 37 30 19 24 17 17 15 28 24 30 35 33 28 25 39 33 32 25 32 31 27 26 17 15 15 21 18 15 15 12 11 12 12 10 13 13 18 17 14 14 14 26 26 19 18 19 15 21 11 11 11 16 16 10 13 12 14 11 8 8 8 8 8 8 12 12 8 8 8 8 10 7 8 7 7 7 8 10 8 8 8 8 6 8 6 9 9 12 12 12 15 15 9 9 9 9 9 9 10 18 16 24 16 18 12 9 9 9 9 11 10 12 10 11 9 7 6 6 6 6 6 6 8 6 6 6 6 8 8 8 8 9 10 20 23 18 16 11 11 8 8 8 8 8 8 14 19 11 11 10 13 15 20 22 22 20 9 8 10 8 8 8 8 8 10 10 19 10 8 8 8 6 6 6 6 8 8 8 10 11 14 15 10 10 9 9 9 9 10 11 11 10 10 8 8 8 8 8 9 9 10 10 8 8 8 8 6 6 6 9 9 9 11 25 16 10 9 9 9 9 9 18 21 24 10 10 10 10 8 8 8 8 10 10 11 11 12 11 10 8 8 8 8 8 8 8 8 10 12 13 10 8 8 8 9 6 8 6 6 8 8 8 12 8 7 7 6 8 8 9 8 8 8 8 8 8 11 8 8 8 8	Open. Hide. 0 0 3 7 6 6 8 9 9 9 9 13 17 10 8 8 8 10 22 22 39 39 41 39 39 35 30 29 32 37 33 37 23 23 11 9 12 14 11 11 11 11 18 21 39 47 47 48 41 36 36 36 36 42 42 48 53 53 53 43 28 20 15 23 19 28 22 28 28 33 29 42 33 33 41 42 57 50 54 48 48 48 53 54 68 68 68 68 68 68 57 48 47 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 57 57 57 57 47 57 57 68 68 68 68 59 59 59 59 59 59 59 68 68 59 57 42 42 42 42 42 51 54 68 68 48 48 48 48 48 57 57 48 48 48 57 47 50 50 50 47 47 47 47 41 41 59 47 59 59 59 59 44 35 39 41 37 37 37 42 50 50 50 50 50 47 47 47 47 39 39 30 39 32 43 59 59 59 59 57 57 57 48 48 43 43 41 41 41 41 41 41 41 29 30 30 30 25 27 36 37 44 44 43 43 21 21 11 21 15 24 24 28 28 36 32 37 30 30 10 9 9 10 9 16 21 37 37 31 37 12 9 9 9 9 9 16 34 31 26 24 19 20 24 24 19 19 11 11 11 12 12 24 13 10 10 13 12 13 19 25 17 14 14 12 12 12 24 24 22 15 16 15 18 23 23 19 27 14 15 11 15 10 9 9 8 12 8 10 10 10 12 15 17 18 15 15 13 14 12 11 11 14 14 12 12 10 9 9 10 8 9 9 10 13 12 11 8 8 7 7 7 9 9 8 9 9 9 9 9 12 12 12 13 17 10 8 8 8 7 8 8 8 8 9 9 8 7 6 6 6 6 6 8 8 8 8 8 8 9 10 12 22 16 11 11 12 8 8 9 9 9 10 10 10 10 9 9 9 12 9 11 11 11 17 7 6 6 6 6 8 8 8 8 8 8 10 9 9 11 11 12 9 10 11 9 9 9 10 11 10 11 11 15 22 22 26 19 15 11 11 9 8 9 9 12 12 12 10 10 10 10 10 10 9 9 9 11 12 12 8 8 8 6 6 6 8 8 8 8 10 10 10 10 10 12 9 8 8 8 8 8 8 8 8 8 9 8 8 8 7 8 8 8 8 8 8 8 8 8 8 9 8 14 9 8 8 8 8 12 9 7 6 6 6 6 6 10 10 10 11 11 16 11 8 8 8 8 8 6 6 6 7 9 9 9 8 8 8 8 9 10 17 18 22 9 9 13 13 15 8 8 8 8 8 8 10 9 9 9 11 14 12 8 8 8 8 9 8 12 10 10 10 10 10 11 14 22 26 30 29 22 11 9 9 9 8 8 8 8 9 8 9 10 10 16 12 9 8 6 6 8 10 11 10 9 9 10 8 8 8 8 8 8 10 10 12 10 11 12 12 7 6 6 6 6 6 6 8 8 10 15 12 12 12 16 12 9 9 10 9 9 8 8 3 0 3 6 7 11 12 15 11 10 9 8 8 8 6 7 7 7 6 6 8 10 12 11 10 10 11 11 11 9 9 9 9 9 6 7 6 6 6 6 8 8 6 6 6 10 11 14 18 10 10 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no344_b23.g1 MSMg01no344_b23.g1 CHROMAT_FILE:
MSMg01no344_b23.g1 PHD_FILE: MSMg01no344_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:12 2005
         (194 letters)



>mm_chr11_11847584_11848177
          Length = 594

 Score =  375 bits (194), Expect = e-109
 Identities = 194/194 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcccagatagaagtaaatggaaactattctaggtttgcatcaagcatggctttttacgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcccagatagaagtaaatggaaactattctaggtttgcatcaagcatggctttttacgcc 335

                                                                       
Query: 61  ctatgagatttgtaactgccagtgggaacagatcttgcttttaaatatgtttctgccaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctatgagatttgtaactgccagtgggaacagatcttgcttttaaatatgtttctgccaag 275

                                                                       
Query: 121 atgtccccttctcgcagtatcaaaatggaagctaagatgtgttggctcagaaactgctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgtccccttctcgcagtatcaaaatggaagctaagatgtgttggctcagaaactgctct 215

                         
Query: 181 tgggaacggtcctc 194
           ||||||||||||||
Sbjct: 214 tgggaacggtcctc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space:   108996
Effective search space used:   108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information