NTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATATACTTCTCTCTCTACCAATATCATCCAGGGGAGATGTCTGC
ATGCATGGATGCAATTATTTGAGATGAAAACGCTTTCTGCCATTGTATAT
TTTATACCATAATATGACAAAACAGTCATATTGCCTGTGCATTAGAACGA
TTGGGGAGGAAAATGAATAGCGCTTAGGTTACTTATATTCATTTTTATGT
ATGCCATTTATTTATAGCTATGGAGAATAATATCTACTTCTTAAATTCTC
AAGATATTGAGGCCTACTAGATTTAGTAGTAACAAGATTCATGGGAATAT
TATATGAGTTTACCACCTAGTTACTATGCAGAGAGTACCTTATATGTTTC
CTTCCTTTGATTATTTAATATTTATAACTATATATATATATATAAATTTA
CAGAAGATACATAGGACTTTTAGACTCAATATACTAATAAACCAGTACCC
AGTGCGGAGAAAAGAAAGAAATAGAACCCATCTTCTTAGATGCTTATCCT
ACTGACAGTAGTAAGAGGGTTATGGAAAGAATTGCCAATCCTCAAAGGCG
AAAATCCAAGCTTGACCAAGTGGCCTTGCCTAGTGGTCACTCCAAAAAAA
AAATACGTTTTTATTTCCTCCCATAAAAAAATAATCGCCACTTCACACCA
CCTTTATTGGTTTAATTTCTGCCTGTGGTAATATCTATTTTGTG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTTAATG
GGGTTATTTGATTTTCTGAAGTCCACCTTCTTAAGTTCTTTATTTATGTT
GGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAAT
CTGTTGGTGGTCTTTTTGTCATATTGACGGTGTCTTTTGCCTTGCAGTAG
CTTTGGAGTTTCATGAGGTCCCATTTGTCAATTCTCGATCTTACAGCACA
AGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTGCCCCATATCTTCA
AGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTAT
GTGAAGTTCCTTGATACACTTAGATTTGACCTTAGTACTAGGAGATAGGT
ATGGATCGATTCGCAGTCTTCTACATGATAACAACCAGTTGTGCCAGTAC
CATTTGTTTGAATATGCTGTCTTTCTTTCTATTGGATGGTTTTTTCTTTC
CTGTCTAATATCAAGTTGACTATTATTTGTGTTGGTTCTCTTTTCTGGTG
TTTTCAATTGCCATTCTTTTTCGTCTTTCTTGGCCTTTCTTGCATTTCTT
TTCCTTCTTTTTTTTTCTTTTTTCTATTTTTTCTCTTCTACATGCTTTCT
TCTTTTTTTTTTGTTTTTATTTCCCCTCTCTCCCTTTGTTTTTTT

Query= MSMg01no344_k15.b1 MSMg01no344_k15.b1 CHROMAT_FILE:
MSMg01no344_k15.b1 PHD_FILE: MSMg01no344_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:55 2005
         (451 letters)



>mm_chr11_37791871_37792721
          Length = 851

 Score =  764 bits (395), Expect = 0.0
 Identities = 441/469 (94%), Gaps = 21/469 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctctctaccaatatcatccaggggagatgtctgcatgcatggatgcaattatttgagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctctctaccaatatcatccaggggagatgtctgcatgcatggatgcaattatttgagat 485

                                                                       
Query: 61  gaaaacgctttctgccattgtatattttataccataatatgacaaaacagtcatattgcc 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaaaacgctttctgccatggtatattttataccataatatgacaaaacagtcatattgcc 425

                                                                       
Query: 121 tgtgcattagaacgattggggaggaaaatgaatagcgcttaggttacttatattcatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 424 tgtgcattagaacgattggggaggaaaatgaatagcgcttaggttacttatattcgtttt 365

                                                                       
Query: 181 tatgtatgccatttatttatagctatggagaataatatctacttcttaaattctcaagat 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tatgtatgacatttatttatagctatggagaataatatctacttcttaaattctcaagat 305

                                                                       
Query: 241 attgaggcctactagatttagtagtaacaagattcatgggaatattatatgagtttacca 300
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attgaggcctactagaaatagtagtaacaagattcatgggaatattatatgagtttacca 245

                                                                       
Query: 301 cctagttactatgcagagagtaccttatatgtttccttcctttgattatttaatatttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cctagttactatgcagagagtaccttatatgtttccttcctttgattatttaatatttat 185

                                                                       
Query: 361 aactatatatata--tatata-------------------aatttacagaagatacatag 399
           |||||||||||||  ||||||                   ||||||||||||||||||||
Sbjct: 184 aactatatatatacatatatatattttatatatatattttaatttacagaagatacatag 125

                                                            
Query: 400 gacttttagactcaatatactaataaaccagtacccagtgcggagaaaa 448
           |||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 124 gacttttagactcaatatactaataaaccagtaccccgtggggagaaaa 76


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space:   370881
Effective search space used:   370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)