Query= MSMg01no344_k21.b1 MSMg01no344_k21.b1 CHROMAT_FILE:
MSMg01no344_k21.b1 PHD_FILE: MSMg01no344_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:56 2005
(437 letters)
>mm_chr11_24801231_24802067
Length = 837
Score = 551 bits (285), Expect = e-161
Identities = 363/433 (83%), Gaps = 69/433 (15%)
Strand = Plus / Plus
Query: 5 gaattctaaataacaaccaacaaatacaaggtgaaaagtaatgctgaaccccatctttgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaataacaaccaacaaatacaaggtgaaaagtaatgctgaaccccatctttgg 264
Query: 65 aaagacaaagtcttagttgtcaaactactgcagccttagtgaaacatccctcctttcctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagacaaagtcttagttgtcaaactactgcagccttagtgaaacatccctcctttcctc 324
Query: 125 tctccctccctccctccctctctccctcccttcctccctctctttctctctccctccctc 184
|||||||| ||||||||| ||||||||||||||||||
Sbjct: 325 tctccctc------------------------cctccctctgtttctctctccctccctc 360
Query: 185 tctccctccctcggcccctcctttcctttccttccttccttccttccttccttccttcct 244
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 361 tctccctccctcggcccctcctttcctt-ccttccttccttccttccttccttcc----- 414
Query: 245 tccttcctcccttccttccttccttccttccttccttcagaatatcctttattacccaag 304
|||||||||||||||||||||
Sbjct: 415 ---------------------------------------gaatatcctttattacccaag 435
Query: 305 ctagacttgaattcttgatcctacttcgtgatgctcaagggctaaaattataggtttatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctagacttgaattcttgatcctacttcgtgatgctcaagggctaaaattataggtttatg 495
Query: 365 tacagccatacccagcagtgaaacttcttgtatatattggatctagagtcaaatgacatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tacagccatacccagcagtgaaacttcttgtatatattggatctagagtcaaatgacatt 555
Query: 425 tttcagtttttaa 437
|||||||||||||
Sbjct: 556 tttcagtttttaa 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_k21.g1 MSMg01no344_k21.g1 CHROMAT_FILE:
MSMg01no344_k21.g1 PHD_FILE: MSMg01no344_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:56 2005
(458 letters)
>mm_chr11_24982705_24983562
Length = 858
Score = 605 bits (313), Expect = e-177
Identities = 321/325 (98%), Gaps = 3/325 (0%)
Strand = Plus / Minus
Query: 1 tcttggctagggaggtgtttttagaaattcctggagcctgtaacagacatgcatatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcttggctagggaggtgtttttagaaattcctggagcctgtaacagacatgcatatggtt 263
Query: 61 ttttatttctaatactgcaattttaaaagtattacatttgggatctgttatattttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttttatttctaatactgcaattttaaaagtattacatttgggatctgttatattttcttt 203
Query: 121 gttttttaaatagacttagagatatttaggacttgttggtgtataatttcttgagttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gttttttaaatagacttagagatatttaggacttgttggtgtataatttcttgagttctt 143
Query: 181 tatgtatattgggatatagttcttctgtttaatatagggttgttggagatctttttttcc 240
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 142 tatatatattgggatatagttct---gtttaatatagggttgttggagatctttttttcc 86
Query: 241 attctgtaggctaccattttgtccaattgatggtgtccttagtgtttcaaatgcttttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 attctgtaggctaccattttgtccaattgatggtgtccttagtgtttcaaatgcttttca 26
Query: 301 gtttaatgaggtcccacttattaat 325
|||||||||||||||||||||||||
Sbjct: 25 gtttaatgaggtcccacttattaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
