Query= MSMg01no345_a23.b1 MSMg01no345_a23.b1 CHROMAT_FILE:
MSMg01no345_a23.b1 PHD_FILE: MSMg01no345_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:26 2005
(471 letters)
>mm_chr11_47007675_47008545
Length = 871
Score = 828 bits (428), Expect = 0.0
Identities = 443/448 (98%)
Strand = Plus / Plus
Query: 24 tattattattattattattattattattattgacaggttactcatcaatgtctgaattta 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tattattattattattattattattattattgacaggttactcatcaatgtctgaattta 283
Query: 84 ctagcctataaaatggaatagcaatatttcttatttcttatcacaatgaccagcctgtaa 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctagcctataaaatggaatagcaatatttcttatttcttatcacaatgaccagcctgtaa 343
Query: 144 actaaatgagacaccagttatccatgcaaagccaacctgcccctcaacaagacacaccat 203
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actaaatgagacaccggttatccatgcaaagccaacctgcccctcaacaagacacaccat 403
Query: 204 tagccattagacataatgttgggttatggttgttgataatggaccaatttaagacagtgt 263
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tagccattagacatagtgttgggttatggttgttgataatggaccaatttaagacagtgt 463
Query: 264 ggactacaacatataaaatggaaatgaaaagcaaagttctgattcattacttctattttc 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ggactacaacatataaaatggaaatgaaaagcaaagttctgattcattacttctattttc 523
Query: 324 acagatgactttgaaatgactgacaagtaagaatagtagtgatagtgcccttcacaggtt 383
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 524 acagatgactttgaaatgactgacaagtaagaatagtagtgatagtgtccttcacaagtt 583
Query: 384 tggtaccaggattttcctgtctttaaagtcttatggttcatagcaccatctggaagctgg 443
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 584 tggtaccaggattttcctgtctttaaagtgttatggttcatagcaccatctggaagctgg 643
Query: 444 ttaacagtggttactaccatctaagcca 471
||||||||||||||||||||||||||||
Sbjct: 644 ttaacagtggttactaccatctaagcca 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_a23.g1 MSMg01no345_a23.g1 CHROMAT_FILE:
MSMg01no345_a23.g1 PHD_FILE: MSMg01no345_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:26 2005
(474 letters)
>mm_chr11_47186645_47187519
Length = 875
Score = 584 bits (302), Expect = e-171
Identities = 350/366 (95%), Gaps = 2/366 (0%)
Strand = Plus / Minus
Query: 111 ttccaaatctgttggtggcctttttgttttattgacagtgtc-ttttgccttacagaagc 169
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 875 ttcccaatctgttggtggcctttttgttttattgacagtgtctttttgccttacagaagc 816
Query: 170 tttgaaattttatgaggtcccatttgttgattcttgatcgtacagcataagccatttatg 229
|||| |||||||||| ||||||||||| |||||||||||||| |||| |||||||| |||
Sbjct: 815 tttgcaattttatgaagtcccatttgtcgattcttgatcgtatagcacaagccattgatg 756
Query: 230 ttctgttcaggaattttccccctgtgcccatatcttcgaggctttttcccacattctcct 289
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 755 ttctgttcaggaatttttcccctgtgcccatatctttgaggctttttcccacattctcct 696
Query: 290 ctataagtttcagagtatctttgaccacaatttttgacatt-aaaaaaaagaataagaac 348
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 695 ttataagtttcagagtatctttgaccacaatttttgacattaaaaaaaaagaagaagaac 636
Query: 349 caaatacatttgaagtaattatttcttttgttaaaaagacacaattttctaagaccagaa 408
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 caaatacatttgaagtaattatttcttttgttaaaaagacacaattttctaagaccagag 576
Query: 409 agaggatcgcttgcttaagaagcacaggcaatctagcatagaggcagtgtttctgggttc 468
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 575 agaggatggcttgcttaagaagcacaggcaatctagcatggaggcagtgtttctgggttc 516
Query: 469 ctggca 474
||||||
Sbjct: 515 ctggca 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 875
Length adjustment: 10
Effective length of query: 464
Effective length of database: 865
Effective search space: 401360
Effective search space used: 401360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
