Query= MSMg01no345_l05.b1 MSMg01no345_l05.b1 CHROMAT_FILE:
MSMg01no345_l05.b1 PHD_FILE: MSMg01no345_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:12 2005
(558 letters)
>mm_chr11_48064878_48065835
Length = 958
Score = 1058 bits (547), Expect = 0.0
Identities = 553/555 (99%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 5 gaattccatattcagatcttggccataacatattattatatatgtgcaaacatttcattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccatattcagatcttggccataacatattattatatatgtgcaaacatttcattt 263
Query: 65 aaaaaaa-ctgaaatataaaacacttctcattccaaccatgtcaaattacaaacattgga 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaaaaaactgaaatataaaacacttctcattccaaccatgtcaaattacaaacattgga 323
Query: 124 acagcaatattgcccgattgtgtttctttagatatatttgcatgcaaggtctctattaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagcaatattgcccgattgtgtttctttagatatatttgcatgcaaggtctctattaag 383
Query: 184 aaagaatatatttgtcattcatacctgtaaaagagaagtgaccaaatcagaattgtacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 aaagaatatatttgtcattcatacctgtaaaagagaagtgaccaaatcagaattggacag 443
Query: 244 aaggacctgagttgtgacaagctccagcaaaagcctcttttggtctcatgccaagctctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaggacctgagttgtgacaagctccagcaaaagcctcttttggtctcatgccaagctctg 503
Query: 304 gaccaagtgggcactttgaaactgtcagatgctattggaaagaggtagggccttgatgca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaccaagtgggcactttgaaactgtcagatgctattggaaagaggtagggccttgatgca 563
Query: 364 gcataccaaagagccgtgttttcaggatacccaggaggactcagcccgtggtcagagcag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcataccaaagagccgtgttttcaggatacccaggaggactcagcccgtggtcagagcag 623
Query: 424 cttgttaactttggataatccaaaaaagaaagccacactagggccatgttttagagccct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttgttaactttggataatccaaaaaagaaagccacactagggccatgttttagagccct 683
Query: 484 tctggagaccacaaaggcaaaccaagcattggctcctgacagttacctgggtaaatctca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tctggagaccacaaaggcaaaccaagcattggctcctgacagttacctgggtaaatctca 743
Query: 544 gagccttcctcagtc 558
|||||||||||||||
Sbjct: 744 gagccttcctcagtc 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_l05.g1 MSMg01no345_l05.g1 CHROMAT_FILE:
MSMg01no345_l05.g1 PHD_FILE: MSMg01no345_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:12 2005
(618 letters)
>mm_chr11_48279105_48280125
Length = 1021
Score = 630 bits (326), Expect = 0.0
Identities = 351/360 (97%), Gaps = 3/360 (0%)
Strand = Plus / Minus
Query: 1 ttgttcaaatgccacttaaattgaatcacagaaagattaaatttatttgtctgtaaaatt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttgttcaaatgctacttaaattgaatcacagaaagattaaatttatttgtctgtaaaatt 464
Query: 61 agtgtaattatattgacatttatagcattgtaatatgctaatataccttcaccatg--tt 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 463 agtgtaattatattgacatttatagcattgtaatatgctaatataccttcaccatgtttt 404
Query: 119 ttttttctaagcatgtaataactttgcttataataa-taataaaaaaacccctaatgtta 177
||||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 403 ttttttctaagcatgcaataactttgcttataataagaaaaaaaaaaaaccctaatgtta 344
Query: 178 tttcagaaagtgaaggtaaaatttaatgaaatgaaagaggtccaaagctaggatgctatc 237
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 343 tttcagaaagtgaaggtaaaatttaatgaaatgaaagaggtccaaagataggatgctatc 284
Query: 238 tgagctaaaacacttcttttgatcctgctttttgtttatagtcttgactctattgctcaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgagctaaaacacttcttttgatcctgctttttgtttatagtcttgactctattgctcaa 224
Query: 298 atgcctaacagaaccctctctaccagaggttctcaacatgtgggttgaacgacacttttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atgcctaacagaaccctctctaccagaggttctcaacatgtgggttgaacgacacttttt 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1021
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1011
Effective search space: 614688
Effective search space used: 614688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
