Query= MSMg01no346_c08.b1 MSMg01no346_c08.b1 CHROMAT_FILE:
MSMg01no346_c08.b1 PHD_FILE: MSMg01no346_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:45 2005
(440 letters)
>mm_chr11_45905537_45906376
Length = 840
Score = 774 bits (400), Expect = 0.0
Identities = 427/436 (97%)
Strand = Plus / Plus
Query: 5 gaattcagtcagatctgtgaatgactcccgctgaatctctggatgctaaggcgaggtagg 64
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtcagacctgtgaatgactccctctgaatctctggatgctaaggcgaggtagg 264
Query: 65 cttggcgacacattctgcaagctggcagctgacccagagtctctgtggctgagtgttcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttggcgacacattctgcaagctggcagctgacccagagtctctgtggctgagtgttcct 324
Query: 125 ttgcatcagctggattttgtgtttttctgggtttacatatccctcttgggtggtttctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcatcagctggattttgtgtttttctgggtttacatatccctcttgggtggtttctcc 384
Query: 185 gcaagactgaatgttaattcttaaggcatctgccgtctgactgcatccggagatgggaag 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 gcaagactgaatgttaattcttaaggcatctgctgtctgactgcatccggagatgggaag 444
Query: 245 agtccagcctagactttggagccatgtcccttcctctgggaaatatctcttcttcccaaa 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtctagcctagactttggagccatgtcccttcctctgggaaatatctcttcttcccaaa 504
Query: 305 tctagtatctcttctgattcctctgactccgttctgtcttcagcctgtgttttcttctaa 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 tctagtatctcttctgattcctctgactccgttctgtcttcagcccgtgttttcttctaa 564
Query: 365 aacacagccttgaattaggttttctgttttcagaataaatatttgatcagaccctttctt 424
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaacagttttgaattaggttttctgttttcagaataaatatttgatcagaccctttctt 624
Query: 425 ttctttcctttccttt 440
||||||||||| ||||
Sbjct: 625 ttctttccttttcttt 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_c08.g1 MSMg01no346_c08.g1 CHROMAT_FILE:
MSMg01no346_c08.g1 PHD_FILE: MSMg01no346_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:45 2005
(486 letters)
>mm_chr11_45975137_45976021
Length = 885
Score = 474 bits (245), Expect = e-138
Identities = 322/359 (89%), Gaps = 26/359 (7%)
Strand = Plus / Minus
Query: 135 ttagtctcagcacttgggaggcagacgcagacagataagtgagttcgaggccagcctggc 194
||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||
Sbjct: 885 ttagtctcagcacttgggaggcagacgcaaacagattagtgagttcgaggccagcgtggc 826
Query: 195 ttacagagtgagttccaggacagccagggttacacagagaaaccctgtcttgaaaaccaa 254
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 825 ctacagagtgagttccaggacagccagggctacacagagaaaccctgtcttgaaaaacaa 766
Query: 255 aacaaaaaaccaaaaaacaaaacaaacaaacaaaccaaaaaaaaaaaaaga-agaagaaa 313
||||||||| |||||| | ||||||||||||| |||||| ||| || |
Sbjct: 765 aacaaaaaaacaaaaa-c----caaacaaacaaac----------aaaagagaga-gaga 722
Query: 314 gaaagaaagagagagaga---gaaa-gaaaaaagaagtcacctatttgacaagaggtcct 369
|| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 721 gagagagagagagagagaaaagaaaagaaaaaagaagtcacctatttgacaagaggtcct 662
Query: 370 aatatttgctaagtccatgcaaatgatgtccttggtgagaaaacggctaacaacacagag 429
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatatctgctaagtccatgcaaatgatgtccttggtgagaaaacggctaacaacacagag 602
Query: 430 aattggaaatac--ttttttttttttcattccggtctgtgtctgggtggaggccgggag 486
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 aattggaaatacacttttttttt---cattccggtctgtgtctgggtggaggccgggag 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 885
Length adjustment: 10
Effective length of query: 476
Effective length of database: 875
Effective search space: 416500
Effective search space used: 416500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
