Query= MSMg01no347_b14.b1 MSMg01no347_b14.b1 CHROMAT_FILE:
MSMg01no347_b14.b1 PHD_FILE: MSMg01no347_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:58 2005
(451 letters)
>mm_chr11_92032306_92033156
Length = 851
Score = 857 bits (443), Expect = 0.0
Identities = 446/447 (99%)
Strand = Plus / Plus
Query: 5 gaattccagcattcacacagagctgaaatttggttttcctggtattttggcccaagtgta 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcattcagacagagctgaaatttggttttcctggtattttggcccaagtgta 264
Query: 65 tttccttgacctacaattgcatattagctgtatcttttgcctaccagtaacagaccttga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttccttgacctacaattgcatattagctgtatcttttgcctaccagtaacagaccttga 324
Query: 125 ggttcttagacagcagatttacataagtgagatgcttgtgtttaagaatttcttcttccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggttcttagacagcagatttacataagtgagatgcttgtgtttaagaatttcttcttccc 384
Query: 185 atctccatctactccccagaactaaggctgtcccacagccctctgaacccaaatcctggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atctccatctactccccagaactaaggctgtcccacagccctctgaacccaaatcctggt 444
Query: 245 cagagagagcttgtctccaaggtgtgctctcactcctaagcacactagggagatcattac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagagagagcttgtctccaaggtgtgctctcactcctaagcacactagggagatcattac 504
Query: 305 ctttgttctaataactgtccaaatagggacctgccaggagtgcacagggcacaggatatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttgttctaataactgtccaaatagggacctgccaggagtgcacagggcacaggatatg 564
Query: 365 caaagcagactggaacaggatccttccagtctccatctgtgcccttgagctgaggctgtc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaagcagactggaacaggatccttccagtctccatctgtgcccttgagctgaggctgtc 624
Query: 425 ccacagcccaccatactcaaattcctc 451
|||||||||||||||||||||||||||
Sbjct: 625 ccacagcccaccatactcaaattcctc 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_b14.g1 MSMg01no347_b14.g1 CHROMAT_FILE:
MSMg01no347_b14.g1 PHD_FILE: MSMg01no347_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:58 2005
(457 letters)
>mm_chr11_92177354_92178211
Length = 858
Score = 839 bits (434), Expect = 0.0
Identities = 452/458 (98%), Gaps = 1/458 (0%)
Strand = Plus / Minus
Query: 1 cttttctagagaa-aagggcagtgcagaagtggcagggtgtatgttgagggatcagcgct 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cttttctagagaataagggcagtgcagaagtggcagggtgtatgttgagggatcagcgct 599
Query: 60 gagctataattgagtctagaacccacggtaaaaactggagctatccattacatagatgtt 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 598 gagctataattgagtctagaacccacagtaaaaactggagctatccattacatagatgtt 539
Query: 120 aaaattgtagagatagcaagaggtcttggtgaggaggaggcagaaacactagacatattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aaaattgtagagatagcaagaggtcttggtgaggaggaggcagaaacactagacatattt 479
Query: 180 cttaaaagcaggatagtcacagaaagttaccaggcatgaatgagtgtttatttagtaaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttaaaagcaggatagtcacagaaagttaccaggcatgaatgagtgtttatttagtaaag 419
Query: 240 tgtttaatgattttgtttggtgtataggaccagggctagtatttaagaagaatcagttaa 299
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 418 tgtttaatgattttgtttggtgtataggaccaaggctagtatttaagaagaatcagttaa 359
Query: 300 aggaagaaatgtttttgtctgtaccctacccattcttctcctctacccctgatgttgact 359
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 358 aggaagaaatgtttttgtctgtaccctacccattcttctcttctacccctgatgctgact 299
Query: 360 tctcccagaatgctcttggtttatccataaccttatttctaacaatatctagcctgacaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tctcccagaatgctcttggtttatccataaccttatttctaacaatatctagcctgacaa 239
Query: 420 tgctactagactgaacattttggatacccttttactgt 457
|||||| |||||||||||||||||||||||||||||||
Sbjct: 238 tgctacaagactgaacattttggatacccttttactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 858
Length adjustment: 10
Effective length of query: 447
Effective length of database: 848
Effective search space: 379056
Effective search space used: 379056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
