Query= MSMg01no348_h02.b1 MSMg01no348_h02.b1 CHROMAT_FILE:
MSMg01no348_h02.b1 PHD_FILE: MSMg01no348_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:44 2005
(430 letters)
>mm_chr11_11768696_11769525
Length = 830
Score = 739 bits (382), Expect = 0.0
Identities = 391/394 (99%)
Strand = Plus / Minus
Query: 1 ctttaggacaagaggcaactgtcttccatcagcttcctccccatggcacataagtgcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctttaggacaagaggcaactgtcttccatcagcttcctccccatggcacataagtgcgcc 339
Query: 61 accaagaccagaatagcaccacaggagagagcacttctgggttgcttgtcatacggtgaa 120
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 338 accaagaccagaatagcaccacaggagagagcacttttgggtcgcttgtcatacggtgaa 279
Query: 121 aacaatttcattttcgagtctttatatccaaagacgaatcttctagttttggtacttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aacaatttcattttcgagtctttatatccaaagacgaatcttctagttttggtacttctc 219
Query: 181 aaagaattttacaagtaacaaaatttattgaataactattacaaatccgactgtgttcta 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 218 aaagaattttacaagtaacaaaatttattgaataactattacaaaaccgactgtgttcta 159
Query: 241 gcctatttattgtgctttatataatcaattttcatcctcaaaatacttatgaggattagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcctatttattgtgctttatataatcaattttcatcctcaaaatacttatgaggattagt 99
Query: 301 tgcattatcaaccttagttttcatagcaaagagattgaggctcagacaagttcagtggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tgcattatcaaccttagttttcatagcaaagagattgaggctcagacaagttcagtggca 39
Query: 361 gaaactaaaggcagtgtgtaaagccggtgttaag 394
||||||||||||||||||||||||||||||||||
Sbjct: 38 gaaactaaaggcagtgtgtaaagccggtgttaag 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_h02.g1 MSMg01no348_h02.g1 CHROMAT_FILE:
MSMg01no348_h02.g1 PHD_FILE: MSMg01no348_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:44 2005
(348 letters)
>mm_chr11_11610559_11611306
Length = 748
Score = 646 bits (334), Expect = 0.0
Identities = 345/350 (98%), Gaps = 4/350 (1%)
Strand = Plus / Plus
Query: 1 caggctaaacat--acaaacacctagaaaaagccaagccagtatgaggcttggcagagtc 58
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctaa--atgcacaaacacctagaaaaagccaagccagtatgaggcttggcagagtc 258
Query: 59 caagggaaaagccaatagaaggataggcctgctcaaggctgagctgaaaatgggatgttg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caagggaaaagccaatagaaggataggcctgctcaaggctgagctgaaaatgggatgttg 318
Query: 119 ctaagcaggggaggctaagtccatgactgagcactggacaatctgtgcagaacccagaca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctaagcaggggaggctaagtccatgactgagcactggacaatctgtgcagaacccagaca 378
Query: 179 gaaggaaatgggattgaactctgagaaggtgcattctaggatatgcacccttcagtctcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaggaaatgggattgaactctgagaaggtgcattctaggatatgcacccttcagtctcc 438
Query: 239 ctttgagtgtatttcaatctgatattcatctgccagatctgagagaggctgaccctgtac 298
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctttgagtgtatctcaatctgatattcatctgccagatctgagagaggctgaccctgtac 498
Query: 299 agcctctcagtgagtgcttgcacctaacttttactcttcttagcttagat 348
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcctctcagtgagtgcttgcacctaacttttactcttcttagcttagat 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
