TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTGTATACCTGCTTCCTACCTTAATTTGTAAAATAAAGAAGAGCTGATGA
TTGGGCTGATAAAAGGGAAGGTGGAGTAGATGATGGTGAGAGAAGAAGAA
GAGGAAAGGAAAGGGAAGAGGAAAGAAAGTAGAAAAGGGAGAGGATGCAG
AGTGGGAGGAAGAAGAAGAAGGGCAGAGCAGAAGTAATTGGCCTGGAGAA
ACTGCAAGGTATAAGGGATCTTATAGATGTGGAAGATGGTAGTGTAGTGA
TAGATCTGCACAATCTATGTGAACAGCATGTATTCATATTAACTGACTCG
TGTTTTCATTGCTGGGGCATATTTTGGATGAAGAGATTTACTGCAACACT
TTTCTATTTTCTGTTCCTACGAAAAGTACACATTTATCTGTATCATAGTC
AATGTTTCTTATTCTCTAGTATTGTTATTGCCAACCTAGTTTGACTACAA
TGTCATTTTCAGAATGTGTTTGTGAAATAACTGTTTCTCCACATATATAT
ATATATATATATATATATATATATATATATATATATATATTATCACTTTG
GACTATACAATTATATTTATAATTAACGATTGCTGACTACATGGTCCCNA
AGTCTAAGAGCTGGAACTGAACTGAAAGCTCCTCCCTTGAGGATTAGCTT
TCTTGATACCCATAGTG

TGGGTGGGGGGTGCGGAGGGNAGTTTGCCTCTGCCCACGGTATATTGGAT
AGATTATGAAAGGCGGCGCGGCGGGGATTGCGGGAAATGTATAGGAAGCA
TTATACATTCCTCCGCGCTTCCGCCCGGTACCCTTATGTGAATGTTATAT
ATTTTCATATACCCCTTCAGCCTCAAAATCGTGAGCGCCACTCCACTTTT
ATTACGCGCTCACCGCGCCCGCGATCCGCGATTCGCTGCGTCCATAAATA
TAACATATTATAACTTTACCTGTTTATTATATGTTATAAGCTGTAGCTAT
ATAGTATTGAGCGCTGGGAAAGAGTGGGGTGATGGGGTATCTTAACAGAC
GCCTGCGGGCGCGTTTATGTTATGTTGTTTCATGTCTTGCCTTGATATCC
TGTTTTCGCGGGCAGACTCTCGCATCGCCCGTTTTATTAGCGCGATTCGT
TCCCAATTGTAGGTGTGTTTTGTGACCGGCTTGTTATGTGTATATTGACA
CCACCGTATATTATGCGTGCGCGCGGAGCTCCTTCAGAGTTTAATTGATA
TAAGGTGACGTGTGCGGCGCGCGACGGCGTAGGTGAGACAACGTGCGGGT
GAGAAGAGGAGCACTTAGTTATCAAAGCGATATGACCACGAGTAACCAGA
TAAATGCGGTATTAATACAATCACCCGTTATGCAATATTCTTTATCTTAA
TACCGGGTGCGACCCCAGCCATACACGACGAACTATCGTCTATTAATATA
CTTATAGTGCTAGCCGCCTCCCCTGTACCGCACGCGGTTAGTATAAGTAT
ATTATGTAACATGTGGAGTCCACACCCCTCATTATACACTCCAACGAATG
TTACTATACTATATCGAATTCGTCGTACGTCGTCGGTCGAGTATCTCGAC
CCCTAACCTGTCGGCTCGTTTATACTCGCGGCGGCGGTCAACTACTATAT
AGTCTATATGTGTATGTGTACACGAGCAGCGTCGCACTTTGTCCCCGCAG
GTTCGTGTGCGATCGCACGTCGCTCGCAATTGTATCCGTACGTACAAGAA
G

Query= MSMg01no348_k12.b1 MSMg01no348_k12.b1 CHROMAT_FILE:
MSMg01no348_k12.b1 PHD_FILE: MSMg01no348_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:01 2005
         (602 letters)



>mm_chr11_14728238_14729239
          Length = 1002

 Score =  907 bits (469), Expect = 0.0
 Identities = 515/547 (94%), Gaps = 27/547 (4%)
 Strand = Plus / Minus

                                                                        
Query: 59   gattgggctgataaaagggaaggtggagtagatgatggtgagagaagaagaagaggaaag 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gattgggctgataaaagggaaggtggagtagatgatggtgagagaagaagaagaggaaag 943

                                                                        
Query: 119  gaaagggaagaggaaagaaagtagaaaagggagaggatgcagagtgggaggaagaagaag 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942  gaaagggaagaggaaagaaagtagaaaagggagaggatgcagagtgggaggaagaagaag 883

                                                                        
Query: 179  aagggcagagcagaagtaattggcctggagaaactgcaaggtataagggatcttatagat 238
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 882  aagggcagagcagaagtacttggcctggagaaactgcaaggtataagggatcttatagat 823

                                                                        
Query: 239  gtggaagatggtagtgtagtgatagatctgcacaatctatgtgaacagcatgtattcata 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822  gtggaagatggtagtgtagtgatagatctgcacaatctatgtgaacagcatgtattcata 763

                                                                        
Query: 299  ttaactgactcgtgttttcattgctggggcatattttggatgaagagatttactgcaaca 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 762  ttaactgactcgtgttttcattgctggggcatattttggatgaagagatttactgtaaca 703

                                                                        
Query: 359  cttttctattttctgttcctacgaaaagtacacatttatctgtatcatagtcaatgtttc 418
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 702  cttttctattttctgttcctacgaaaagtacacatttatccgtatcatagtcaatgtttc 643

                                                                        
Query: 419  ttattctctagtattgttattgccaacctagtttgactacaatgtcattttcagaatgtg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642  ttattctctagtattgttattgccaacctagtttgactacaatgtcattttcagaatgtg 583

                                                                        
Query: 479  tttgtgaaataactgtttctccacatatatatatatatatatatatatatatatatatat 538
            ||||||||||||||||||||||||                        ||||||||||||
Sbjct: 582  tttgtgaaataactgtttctccac------------------------atatatatatat 547

                                                                        
Query: 539  atatatatatattatcactttggactatacaattatattt---ataattaacgattgctg 595
            ||||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||||
Sbjct: 546  atatatatatattatcactttggactacacaattatatttatcataattaaggattgctg 487

                   
Query: 596  actacat 602
            |||||||
Sbjct: 486  actacat 480


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)