XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTG
AATGTTGTCATACAATGCAAGATGGGCAAGATGGTACAATAGTGGCCTGA
AGGCTAGAAGGGTAACTAACTGCTTTCTGACTGGATTTGAGGCCTATTCC
ACAGGAAGGAACTCATGCCCAGTGTTGTAAACCTGGTGAAAAGCCATGGC
TCCAGAGGTCACAGCCCTGAGAGGGAGCCTGTTACTATGCTTTCCTAGGT
AAGACTTGTGATCTAAATATGCTAAACACCTCAGCCTTGCGCAGCTTCTG
TAGTGAGCAGCAGGTAATGCAGAGACTCACAACTGGTCAAAGTACTGAGA
ATAAATGACTGTCAAATTTAGAGACAGCTCTAAATAGAACGTCTGTATCA
ACCCCCTGTAAGGCACGGGGACATCCTGAAAGCGGAGGCAGAAAGAACAG
AGGAGCTAGAGATGGAAGAAGACATGCTGCTGCAAAGTGTTGCCTTCTGA
ACATAACACCATCGCCTGCACAAGACACGCACAAGAGCATGCCCACGAGA
TTAGCCACTATCTAGCATGCTGCGTTAGCCGGACTCCGTGTTCTGCCTCA
CCCTCAACCCCACCCCACAGAACATGATCATACATGCAGGCGAGAAGTTG
ACTCCTCTCCAGGAGCGTGTATTTTTATCATGCCCAAAATTGTTTCTACT
CTCTTCTATCACTGTTTCCGTGCTCCCTATATACACCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGATGGGAGACAGGAGTTGTTGAT
CGATTCTTTGGCAGCTGTGATGCTTCAGAACCGATGGGGGCTAGATCTCT
TGACAGCTAAAGAAGGTGATCTTTGCCTGCTCCTCCAAGAAGAATGCTGT
TTCTATGTCAACCAATCCAGGATAGTGAGAAATAAAATCCAGGAACTACA
GTCAGACATCAAGAACTTCAGAGACCGTGAGACCTCCAGTTCTGGGATTT
TTGACAATCCTATTTGGAAGTGGATACTCCCTTTCGTAACACCTTTCCTA
GTCAGCTTCCTGGTGTTATTACTATTTGCTCCCTGCCTCATTAATATTTT
CTTTACATTCCTTTAATGACAAATACAGAAAAGTTCTAACCAAACTATTA
ATCAGCTCCTATTACAGGATTACCAGCCACTGCCCACAGAAGAGCCATTG
TCCACAGAAAAACCTGATGTGAACGTTCATCAAGCGGATCCCAGTGGTGA
AAGCCATGCTATACCCCAAAATTGACCTCGCCCCTAGACAGCATGAAGCA
GCTTAAGAGACACGACACCCTCGTTCTCTTTTCACCATCGGCTTTCCCCT
CCCTTTACCTTCCCTTCTCTTTATTATAACAAGAATGTAAGTATGCTGTC
ATTACGTCCTCTGAAACCTGTGGACTCACATACGTAACTGCTT

Query= MSMg01no349_m04.g1 MSMg01no349_m04.g1 CHROMAT_FILE:
MSMg01no349_m04.g1 PHD_FILE: MSMg01no349_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:28 2005
         (514 letters)



>mm_chr11_20338633_20339545
          Length = 913

 Score =  963 bits (498), Expect = 0.0
 Identities = 510/514 (99%), Gaps = 1/514 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagatgggagacaggagttgttgatcgattctttggcagctgtgatgcttcagaaccgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatgggagacaggagttgttgatcgattctttggcagctgtgatgcttcagaaccgat 260

                                                                       
Query: 61  gggggctagatctcttgacagctaaagaaggtgatctttgcctgctcctccaagaagaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggggctagatctcttgacagctaaagaaggtgatctttgcctgctcctccaagaagaat 320

                                                                       
Query: 121 gctgtttctatgtcaaccaatccaggatagtgagaaataaaatccaggaactacagtcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgtttctatgtcaaccaatccaggatagtgagaaataaaatccaggaactacagtcag 380

                                                                       
Query: 181 acatcaagaacttcagagaccgtgagacctccagttctgggatttttgacaatcctattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatcaagaacttcagagaccgtgagacctccagttctgggatttttgacaatcctattt 440

                                                                       
Query: 241 ggaagtggatactccctttcgtaacacctttcctagtcagcttcctggtgttattactat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaagtggatactccctttcgtaacacctttcctagtcagcttcctggtgttattactat 500

                                                                       
Query: 301 ttgctccctgcctcattaatattttctttacattcctttaatgacaaatacagaaaagtt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 501 ttgctccctgcctcattaatattttctttacattcctttaatgacaaataaagaaacgtt 560

                                                                       
Query: 361 ctaaccaaactattaatcagctcctattacaggattaccagccactgcccacagaagagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaaccaaactattaatcagctcctattacaggattaccagccactgcccacagaagagc 620

                                                                       
Query: 421 cattgtccacagaaaaacctgatgtgaacgttcatcaagcggatcccagtggtgaaagcc 480
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 cattgtccacagaaaaacctgatgtgaacgttcatcaagtggatcccagtggtgaaagcc 680

                                             
Query: 481 atgctataccccaaaattgacctcgcccctagac 514
           | ||||||||||||||||||||||||||||||||
Sbjct: 681 a-gctataccccaaaattgacctcgcccctagac 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space:   455112
Effective search space used:   455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)