Query= MSMg01no351_m07.b1 MSMg01no351_m07.b1 CHROMAT_FILE:
MSMg01no351_m07.b1 PHD_FILE: MSMg01no351_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:06 2005
(510 letters)
>mm_chr11_98389468_98390376
Length = 909
Score = 915 bits (473), Expect = 0.0
Identities = 497/505 (98%), Gaps = 1/505 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcctcttttgcgatcagatttccagtcacttggtttacttagtagaagatgcg 63
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcctcttcagggatcagatttccagtcacttggtttacttagtagaagatgcg 263
Query: 64 gatgctaaggagaacagaatggcaatccagatagaacttgtcctgaagtgctcaatgcga 123
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 264 gatgctaaggagaacagaatggcaaaccagatagaacttgtcctaaagtgctcaatgcga 323
Query: 124 gccgcgctcagccctcaaccacacaggcaatacctcaatgccggcctttagttgtcctca 183
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 gccgcgctcagccctcaaccacacaggcaatacctcaatgccagcctttagttgtcctca 383
Query: 184 cgatggtaaaacgacactcttatgcccaagccccttttaaaatattagtttctcttatct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgatggtaaaacgacactcttatgcccaagccccttttaaaatattagtttctcttatct 443
Query: 244 aaaatgtccacttttgctttctggataaatgttggaaatttaattaatactttggaccgt 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 aaaatgtccacttttgctttctggataaatcttggaaatttaattaatactttggaccgt 503
Query: 304 aattatggaggctagccatttctgtaaagccctctgacaggcctcatagccaacaccaca 363
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aattatggaggctagc-atttctgtaaagccctctgacaggcctcatagccaacaccaca 562
Query: 364 ggcattcctgatatgtcaccagaggatgaaaagtgaccctaagagcaaaaaaccatgagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggcattcctgatatgtcaccagaggatgaaaagtgaccctaagagcaaaaaaccatgagg 622
Query: 424 tgatgtctttagcaggtcatcaatcctccctgtcacctggtgcttgcatgtccttgaaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgatgtctttagcaggtcatcaatcctccctgtcacctggtgcttgcatgtccttgaaca 682
Query: 484 ttctctcacggtacagtctctttcc 508
|||||||||||||||||||||||||
Sbjct: 683 ttctctcacggtacagtctctttcc 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_m07.g1 MSMg01no351_m07.g1 CHROMAT_FILE:
MSMg01no351_m07.g1 PHD_FILE: MSMg01no351_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:06 2005
(443 letters)
>mm_chr11_98595455_98596296
Length = 842
Score = 833 bits (431), Expect = 0.0
Identities = 440/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 1 caagccagtgaaagaccctagctgaaataaataaacaaatacgcagaacctgagcagtga 60
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 642 caagccagtgaaagaccctagctgaaataaataaacaaatacaca-aacctgagcagtga 584
Query: 61 catgcccagacctctcctctgcacacacacaagtgtagagtcagtgacagaggggcttta 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 583 catgcccagacctctcctctgcacacacacaagtatagagtcagtgacagaggggcttta 524
Query: 121 ggtgagtcaggagggaaaggcagtacaaagagagtggcatgctggcctggcctccctaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggtgagtcaggagggaaaggcagtacaaagagagtggcatgctggcctggcctccctaag 464
Query: 181 gctggggctccggggttatagcatctcccttcctttcttcaattgtcaggagtatggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gctggggctccggggttatagcatctcccttcctttcttcaattgtcaggagtatggaga 404
Query: 241 agggagacatcctccagacaggaggaaatgtcaagaattgattgggactccatccttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agggagacatcctccagacaggaggaaatgtcaagaattgattgggactccatccttctg 344
Query: 301 tctgggtatgtacaacatacctagtagacctgtgatcacagttcagaaagcaaagaccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tctgggtatgtacaacatacctagtagacctgtgatcacagttcagaaagcaaagaccag 284
Query: 361 aggaccaggaggtgggtggagtccagtccaggtcacgggtcttagtaaattccaatccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aggaccaggaggtgggtggagtccagtccaggtcacgggtcttagtaaattccaatccag 224
Query: 421 cctgggacacgtggcaaggccta 443
|||||||||||||||||||||||
Sbjct: 223 cctgggacacgtggcaaggccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 842
Length adjustment: 10
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
