Query= MSMg01no353_e08.b1 MSMg01no353_e08.b1 CHROMAT_FILE:
MSMg01no353_e08.b1 PHD_FILE: MSMg01no353_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:05 2005
(453 letters)
>mm_chr11_85853584_85854435
Length = 852
Score = 861 bits (445), Expect = 0.0
Identities = 448/449 (99%), Gaps = 1/449 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatagatttttttttcagtgagcttaccccttaatgtataatcagataaataaa 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatagatttttttt-cagtgagcttaccccttaatgtataatcagataaataaa 263
Query: 65 atagcactcacagtgtcctgcaaaccatttccgatcaccagattcccacccaacagccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atagcactcacagtgtcctgcaaaccatttccgatcaccagattcccacccaacagccca 323
Query: 125 ctagcccaactttaaatactatacatggttttgtctatttttacatttccattactcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctagcccaactttaaatactatacatggttttgtctatttttacatttccattactcttc 383
Query: 185 tcaacattatgtttgtgaggttcatatgtatttttgaatgtaagcatagttcatctattc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcaacattatgtttgtgaggttcatatgtatttttgaatgtaagcatagttcatctattc 443
Query: 245 tctgtgtcaatataccataatttttgcatacttgtgataataaattttttattacttagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctgtgtcaatataccataatttttgcatacttgtgataataaattttttattacttagc 503
Query: 305 ttttcaattattgtttcttctttcttgctattatgaattgtgctgctacaattgtatgtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttcaattattgtttcttctttcttgctattatgaattgtgctgctacaattgtatgtg 563
Query: 365 catgcatgtgtgtgtgtatgtttatgtctctgtgtatgtgtgtgtgtgtgtgtgtgtgtc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catgcatgtgtgtgtgtatgtttatgtctctgtgtatgtgtgtgtgtgtgtgtgtgtgtc 623
Query: 425 tgtgtctgtgtatgtatgtgtgtgtattt 453
|||||||||||||||||||||||||||||
Sbjct: 624 tgtgtctgtgtatgtatgtgtgtgtattt 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_e08.g1 MSMg01no353_e08.g1 CHROMAT_FILE:
MSMg01no353_e08.g1 PHD_FILE: MSMg01no353_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:05 2005
(394 letters)
>mm_chr11_86042440_86043234
Length = 795
Score = 710 bits (367), Expect = 0.0
Identities = 388/399 (97%), Gaps = 9/399 (2%)
Strand = Plus / Minus
Query: 1 ttctttgcactaaaacctcccatgattttg-tccaattccaggcatttcctaggtcttgc 59
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 595 ttctttgcactaaaacctcccatgattttgttccaattccaggcatttcctaggtcttgc 536
Query: 60 cttatgtttttcctttatagtcactataatttggttgttaattcttatctgttatacttt 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 535 cttatgtttttcctttatagtcactataatttggttgttaatttttatctgttatacttt 476
Query: 120 catatatcaagtgaattaaaagtaccttcaaagtgtctttattcccatttgttttgaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 catatatcaagtgaattaaaagtaccttcaaagtgtctttattcccatttgttttgaaag 416
Query: 180 ttaagatttgtctctgatactcttttattttatacttttactgacagcttccatgcaaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 415 ttaagatttgtctctgatactcttttattttatacttttactgacagcttccatgcagag 356
Query: 240 gaaacc----tttttcatattcttcttctttaatggaccaaattcctatcaagtttctta 295
|||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaaacccaaat----catattcttcttctttaatggaccaaattcctatcaagtttctta 300
Query: 296 ttcggcaggctcaaggactgcagcaggagttgggaggtattcatttttcatttgctaagt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttcggcaggctcaaggactgcagcaggagttgggaggtattcatttttcatttgctaagt 240
Query: 356 tttattgatatgatatattttactgcttatgctataatt 394
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tttattgatatgatatattttactgcttatgctataatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
