NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCAAAAGCCTCTAAATTTCTCCCACAAGGCCTCAGAAGATGT
GGATGCAGCTACAGGATGCTGCCTGGATTGTGATATGATGATCACTGAAA
TATGCAGTGGATAAAAACTGGATACTCTGAGTCAAATGACTTAGCTAAAA
TAAAGGTAAGCTGTTTCTCATGCCACATGTATTCATTCCACAGAGAGATG
TCTTCTGTGCTTGAAAGCCAGACTGACCACCCAAGTTGCCATTGAGACCA
TAGAGACCACAGAGAACTGTTGGCTAGAGGAATCTGTCATTTTTAAAATA
ATATAGCTGCTAAATTATTGTTTATTCTTTCTCAGACTACTGACTACATA
GACAGACAGAAGAAAGCTTTCACAGATATAATCTGTAATCTCCTTACCTA
AACTCAGTTTCCATTAATTAAATGCTTCATATTTCCTCTTCTTGCTATGC
CACTGTTCTAATATTATCTGAGTTACTATAAATTTGCCCAACTCTAAAAA
AAATTCCACTATATGATCCAACTTTTTAATCTTGTTCCTTCTGCTACACA
AAAGGCTCACCTTANAGACTGTTCATGTTGCTAACTCATGTTATCTCTTT
TATAAACTTATAAGCTACAGAAAATCCACTCTACCTCTCTACAGGTACCA
TATATACCTCTCGTGGACCAAGTAGGCTCCATCCAGATAAGTACATCTGC
N

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCAAGACTAAAACCTCTTT
TGTGGGTGGTGTGTGGTAGAGTTCAAACCCCCATAGGTTTATCCAGGGGA
CAAGTTTGATAAAAAAGATGACTTATCTTTTTTTCTGCAGGAAACTGTCA
CAGACTGGTCTCCATGAAGGCATGTTTGTATCTAAATATGCTCTGTTTAT
TTATGTGTGTTTCAGGACCACACCCATAGTTACTAGAGCTTCCATCTGCC
TTGTACCTAAAAAAAGGGGTTCCTCCAACTCACCTTTGCTATATTCTTGC
CCAGTTATTTTCCTTACCACTCAAAATGCTTTTACCACTATCCAGATGCA
ATCATTTTGGAATTTGTTTGGGACTGTGTTAAATATAAGTAGAATGAAAT
TGTAAATGTTTGCATTCTTGAGTCTTTCAATGAGTGAACATATCTCCTTC
CTTTAAAAGTTTTATTTTCTCTTAATATATTGATTTCTGTGTAGATACCA
CATAATACTTTATTATGTATACACAGAGTGATTTTATTCCATTTTTATGG
TTTACTCTGCTGGATTTTCTTTCCTTCCAAATTGTGGAGGGTAATAGACA
GAAACATGATTCATTCATGTTCTCTAACTTTAACAAACTATTGGGGTTTT
TTCCTAACAATTTATGGGGGGGTTAAATCTCAATAAACCGGGAATTTTCT
TAAACTTCAAG

Query= MSMg01no354_f03.g1 MSMg01no354_f03.g1 CHROMAT_FILE:
MSMg01no354_f03.g1 PHD_FILE: MSMg01no354_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:26 2005
         (520 letters)



>mm_chr11_24899136_24900055
          Length = 920

 Score =  990 bits (512), Expect = 0.0
 Identities = 518/520 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attcaagactaaaacctcttttgtgggtggtgtgtggtagagttcaaacccccataggtt 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 720 attcaagactaaaacctcttttgtgggtggtgtgtggtagaggtcaaacccccataggtt 661

                                                                       
Query: 61  tatccaggggacaagtttgataaaaaagatgacttatctttttttctgcaggaaactgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tatccaggggacaagtttgataaaaaagatgacttatctttttttctgcaggaaactgtc 601

                                                                       
Query: 121 acagactggtctccatgaaggcatgtttgtatctaaatatgctctgtttatttatgtgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acagactggtctccatgaaggcatgtttgtatctaaatatgctctgtttatttatgtgtg 541

                                                                       
Query: 181 tttcaggaccacacccatagttactagagcttccatctgccttgtacctaaaaaaagggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 540 tttcaggaccacacccatagttactagagcttccatctgccttgtacctaataaaagggg 481

                                                                       
Query: 241 ttcctccaactcacctttgctatattcttgcccagttattttccttaccactcaaaatgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttcctccaactcacctttgctatattcttgcccagttattttccttaccactcaaaatgc 421

                                                                       
Query: 301 ttttaccactatccagatgcaatcattttggaatttgtttgggactgtgttaaatataag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttttaccactatccagatgcaatcattttggaatttgtttgggactgtgttaaatataag 361

                                                                       
Query: 361 tagaatgaaattgtaaatgtttgcattcttgagtctttcaatgagtgaacatatctcctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tagaatgaaattgtaaatgtttgcattcttgagtctttcaatgagtgaacatatctcctt 301

                                                                       
Query: 421 cctttaaaagttttattttctcttaatatattgatttctgtgtagataccacataatact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cctttaaaagttttattttctcttaatatattgatttctgtgtagataccacataatact 241

                                                   
Query: 481 ttattatgtatacacagagtgattttattccatttttatg 520
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttattatgtatacacagagtgattttattccatttttatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)