Query= MSMg01no354_f18.b1 MSMg01no354_f18.b1 CHROMAT_FILE:
MSMg01no354_f18.b1 PHD_FILE: MSMg01no354_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:29 2005
(546 letters)
>mm_chr11_106056863_106057809
Length = 947
Score = 832 bits (430), Expect = 0.0
Identities = 448/456 (98%), Gaps = 5/456 (1%)
Strand = Plus / Minus
Query: 96 aacttttcaaac----ttttttttttgcattattcaaaagtatttcaggctgtagagatg 151
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 aacttttcaaacttttttttttttttgcattattcaaaagtatttcaggctgtagagatg 888
Query: 152 gctcagtggttaagagcactgactgctcttccagagatgctgagttcagttctcagcaac 211
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 887 gctcagtggttaagagcactgactgctcttccagagatgctgagttcaattctcagcaac 828
Query: 212 acagggtggctcacaaccatctgtaatggaatccaatgccctcttctggtgtgctcatat 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 acagggtggctcacaaccatctgtaatggaatccaatgccctcttctggtgtgctcatat 768
Query: 272 gcataaaataaatatatcttaaagtattctagttaacatgcagaatgggcttcactacat 331
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 767 gcataaaataaatatatcttaaagtattctaggtaacatgcagaatgggcttcactacat 708
Query: 332 gttcatacccgtaacattgtactttacccatgtttgttcccagagtactctt-ccccccc 390
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 707 gttcatacccgtaacattgtattttacccatgtttgttcccagagtactcttcccccccc 648
Query: 391 ttccattcatattttaaatttatatagctttcttctgtacatttttctgtagcttagctt 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ttccattcatattttaaatttatatagctttcttctgtacatttttctgtagcttagctt 588
Query: 451 atcactttgcatagaactgaagcctgtttcctgtgccaaggatgctctggcattgtgcat 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atcactttgcatagaactgaagcctgtttcctgtgccaaggatgctctggcattgtgcat 528
Query: 511 catatatttataaccacacacacttgaccccaaggc 546
||||||||||||||||||||||||||||||||||||
Sbjct: 527 catatatttataaccacacacacttgaccccaaggc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space: 502232
Effective search space used: 502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_f18.g1 MSMg01no354_f18.g1 CHROMAT_FILE:
MSMg01no354_f18.g1 PHD_FILE: MSMg01no354_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:29 2005
(433 letters)
>mm_chr11_105852681_105853513
Length = 833
Score = 760 bits (393), Expect = 0.0
Identities = 423/433 (97%)
Strand = Plus / Plus
Query: 1 caggtgtgagggaccacacctggccacctgacagcgcacattcttcatggctagtccatg 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 caggtgtgagagaccacacctggccacctgacagcgcacattcttcatggctagtccacg 260
Query: 61 ggttttatttggttttaaattgcatttgattattgggggtggctcaccacagtacacatg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 261 agttttatttggttttaaattgcatttgattactgggggtggctcaccacagcacacatg 320
Query: 121 gaagaggtctgaggacaacgtctttcctcagtgccatctgctctgatcactgtctctgtc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagaggtctgaggacaacgtctttcctcagtgccatctgctctgatcactgtctctgtc 380
Query: 181 accgggcaccggctctggaaccagagcatttggttcagtccagcttccgttattttccct 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accgggcaccggctcttgaaccagagcatttggttcagtccagcttccgttattttccct 440
Query: 241 gtgtctataagcaagcccctctgcttatctccatctgaagctggatagtgatggtgcacg 300
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 441 gtgtctataagcaagcccctctgcttgtctccatctgaagctggatggtgatggtgcacg 500
Query: 301 cctttaatcccagcacttttgggaggcagaggcagatgtagtcagtgagaggcagaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctttaatcccagcacttttgggaggcagaggcagatgtagtcagtgagaggcagaggca 560
Query: 361 ggtggatttttgagttcgaggccagcctggtcttcaaattgagttccaggacagccaggg 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 ggtggatttttgagttcgaggccagcctggtcttcgaattgagttccaggacagccaggg 620
Query: 421 ctacacagagaaa 433
|||||||||||||
Sbjct: 621 ctacacagagaaa 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
