Query= MSMg01no355_d01.b1 MSMg01no355_d01.b1 CHROMAT_FILE:
MSMg01no355_d01.b1 PHD_FILE: MSMg01no355_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:34 2005
(509 letters)
>mm_chr11_58112789_58113697
Length = 909
Score = 799 bits (413), Expect = 0.0
Identities = 422/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Minus
Query: 1 cagctaagtgaaaaacagatcgaatcaatacaatatataaaagaggagctcagcagagag 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 424 cagctaagtgaaaaacagatcgaatcaatacaatatataaaagaggaactcagcagagag 365
Query: 61 atggagatgcttaggaaaaaacaaactgaaatactgggtatgaagaacacatgcaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atggagatgcttaggaaaaaacaaactgaaatactgggtatgaagaacacatgcaatcaa 305
Query: 121 ataaggtgctgtgaggaagcctcactgatagaaagactgataggccagacatatggaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ataaggtgctgtgaggaagcctcactgatagaaagactgataggccagacatatggaagg 245
Query: 181 tgaggtcgaagaacggggacgtataagcaaggctcgctagatgggatggacacaaaagac 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 244 tgaggtcgaagaacggggacgtataagcaaggctcgctagat-ggatggacacaaaagac 186
Query: 241 caatccaagagtcagggccagagaaggagcagaacttcatactaaaggcattgtcaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 caatccaagagtcagggccagagaaggagcagaacttcatactaaaggcattgtcaaaaa 126
Query: 301 cattttaataaaaatcatagtggaaaatttcccaaattagggagtgtggcaattcagata 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 125 cattttaataaaaatcatagtggaaattttcccaaattagggagtgtggcaattcagata 66
Query: 361 caagagcccttttggggatcaacctgcctagcctagaaaagagcaagactgaaaataaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 caagagcccttttggggatcaacctgcctagcctagaaaagagcaagactgaaaataaaa 6
Query: 421 atatg 425
|||||
Sbjct: 5 atatg 1
Score = 76.1 bits (39), Expect = 5e-18
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 459 ggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaa 509
|||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 779 ggaggcagaggcagacaaatttctgagttcgaggccagcctggtctacaaa 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_d01.g1 MSMg01no355_d01.g1 CHROMAT_FILE:
MSMg01no355_d01.g1 PHD_FILE: MSMg01no355_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:34 2005
(279 letters)
>mm_chr11_57919494_57920172
Length = 679
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%)
Strand = Plus / Plus
Query: 1 tgaggtatgggaacgagagggtgatgaagagaaggtatcttggagcctgagcttcttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaggtatgggaacgagagggtgatgaagagaaggtatcttggagcctgagcttcttggg 260
Query: 61 tggaaagtggagggagggcgttagtctgtgttgaattgctgtgttctctcttccctgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaagtggagggagggcgttagtctgtgttgaattgctgtgttctctcttccctgtgg 320
Query: 121 ccagcatgcccaggaagttcctttgctcagttaaatgtgctttatatggtctctctcata 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ccagcatgcccaggaagttcctttgctcagttaaatgtgcattatatggtctctctcata 380
Query: 181 tgcctgggaaggatcccttgtggatctgcccgatgatagagtccaaagccgaggctgatc 240
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tgcctgggaaggattccttgtggatctgcctgatgatagagtccaaagccgaggctgatc 440
Query: 241 tggaacaatctttcttcttcttcttcttttttttttg 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaacaatctttcttcttcttcttcttttttttttg 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
