Query= MSMg01no355_f07.b1 MSMg01no355_f07.b1 CHROMAT_FILE:
MSMg01no355_f07.b1 PHD_FILE: MSMg01no355_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:45 2005
(614 letters)
>mm_chr11_34774462_34775475
Length = 1014
Score = 1065 bits (551), Expect = 0.0
Identities = 594/611 (97%), Gaps = 8/611 (1%)
Strand = Plus / Plus
Query: 5 gaattcaactagtactacctgtactagttgttccaaaaacccaatcttaaccctaaccct 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 211 gaattcaactagtactacctgtactagttggtccaaaaacccaatcttaaccctaaccct 270
Query: 65 ag-catgaaattgcaccccagtggaggagtgacagacagttaatggctgctagaagaagc 123
| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 271 -gacatgaaattgcaccccagtggaggagtgacagatagttaatggctgctagaagaagc 329
Query: 124 tgaatttgatttctttcaagacaaagctcctgcttgataacctgtgctctcataaccata 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 330 tgaatttgatttctttcaagacaaagctcctgcttgataacctgtgctctca----ca-- 383
Query: 184 gatgctccttccaggatgaagtccctgctaggttaccagatctcacatagataatccttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatgctccttccaggatgaagtccctgctaggttaccagatctcacatagataatccttc 443
Query: 244 caggatcaagctcctgccaggtttcccatgctctcacagatggtccttgacccatgcata 303
||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 444 caggatcaagctcctgccaggttacccatgctcgcacacatggtccttgacccatgcata 503
Query: 304 tacagacagcagtaagtagtaagtagactgtaagttaaaaaacaccaaaagacaatctaa 363
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 tacagacagcagtaagtagtaagtagactgtaaattaaaaaacaccaaaagacaatctaa 563
Query: 364 tactgagaaggagaagtgggggtcaaaggaagatgagaaaatggaggaagggaatgatga 423
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 564 tactgagaaggagaagtgggggtcaaaggaagatgagaaaacggaggaagggaatgatga 623
Query: 424 ctggatttaaccaaacacattctatgcacttataaaattcctaaacaatataaaatgggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctggatttaaccaaacacattctatgcacttataaaattcctaaacaatataaaatgggg 683
Query: 484 catggggggagaattccaccagaagagtacattatatttagtttattagaaaaaattatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 684 catggggggagaattccaccagaagagtacattatatttagtttattagaagaaattatc 743
Query: 544 agctaacttgaaagtcaatctattgatgtcaatttcttggagaaagaagggagaaagata 603
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agctaacttaaaagtcaatctattgatgtcaatttcttggagaaagaagggagaaagata 803
Query: 604 tttttcaaaat 614
|||||||||||
Sbjct: 804 tttttcaaaat 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_f07.g1 MSMg01no355_f07.g1 CHROMAT_FILE:
MSMg01no355_f07.g1 PHD_FILE: MSMg01no355_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:45 2005
(433 letters)
>mm_chr11_34962835_34963667
Length = 833
Score = 791 bits (409), Expect = 0.0
Identities = 427/433 (98%)
Strand = Plus / Minus
Query: 1 attttatcaactgtgaagacgtaacacgcaataagaagtcatgaggcctcccatgcagag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 633 attttatcaactgtgaagacgtaacacacaataagaagtcatgaggcctcccatgcagag 574
Query: 61 tacgtaagataatgtataaaactcactagtacagcgcctgaggcaccccattaaatgacc 120
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 573 tacataagataatgtataaaactcactagtacagtgcctgaggcaccccattaaatgacc 514
Query: 121 tcagacttagcagacacagtgcaatgatgctgttctacaagtgcgtgttgacaggaagga 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 513 tcagacttaacagacacagtgcaatgatgctgttctacaagtgcgtgttgacagggagga 454
Query: 181 aagaatgaactgattaccgcatgtctgatgaggactagatgtggcaagcctggaaaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aagaatgaactgattaccgcatgtctgatgaggactagatgtggcaagcctggaaaagca 394
Query: 241 acatcctacggcacagggagacatgcccatggttgaacaagcgcttcttagtaggagtga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gcatcctacggcacagggagacatgcccatggttgaacaagcgcttcttagtaggagtga 334
Query: 301 tcaggacaacggctgtctctgaactccaggcagccattttcctggttcatcctctaaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tcaggacaacggctgtctctgaactccaggcagccattttcctggttcatcctctaaaca 274
Query: 361 gcctccaaggaaggctcccccaggacccccgatttggtatccagaatattggttaggcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcctccaaggaaggctcccccaggacccccgatttggtatccagaatattggttaggcat 214
Query: 421 ccgggctctaggc 433
|||||||||||||
Sbjct: 213 ccgggctctaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
