Query= MSMg01no355_l23.b1 MSMg01no355_l23.b1 CHROMAT_FILE:
MSMg01no355_l23.b1 PHD_FILE: MSMg01no355_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:17 2005
(567 letters)
>mm_chr11_76725324_76726290
Length = 967
Score = 1054 bits (545), Expect = 0.0
Identities = 560/565 (99%), Gaps = 2/565 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgccaaactagcctgttttcttatatt-tttttttgctctgttacttcccagg 62
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 204 ggaattctgccaaactagcctgttttcttat-ttctttttttgctctgttacttcccagg 262
Query: 63 ctgtcaacagcttgcctttctagcacacgtggtccgctgctggcactcagtagcacttga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgtcaacagcttgcctttctagcacacgtggtccgctgctggcactcagtagcacttga 322
Query: 123 tgccaaattttccacaggctctccctggcttcacagctcagtgggggaagtttctaaaag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgccaaattttccacaggctctccctggcttcacagctcagtgggggaagtttctaaaag 382
Query: 183 gcttgaaaacgctgaaaacgacgggaagcgcctggccagcataagattcaacccacatgt 242
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcttggaaacgctgaaaacgacgggaagcgcctggccagcataagattcaacccacatgt 442
Query: 243 tagaaattattttatcataatggtctgggggaggggacaccgagtctggtcacagatagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tagaaattattttatcataatggtctgggggaggggacaccgagtctggtcacagatagg 502
Query: 303 aacaccaagggaaggaatgcaggaggttacacatgtctcccaacaggaacttggaatgca 362
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 503 aacaccaagggaaggaatgcaggaggttagacatgtctcccaacaggaacttggaatgca 562
Query: 363 aagtgagccagtaggtcagtaagcttgatttgtagaaggcaagctgtcatgtgtggcttc 422
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 563 aagtgagccagtaggtcagtaagcttgatttgtagaaggcaagctgtcacgtgtggcttc 622
Query: 423 ctgacttccagtttggtaaaagatattccgatctgtgactgtaatctgatttctacctct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctgacttccagtttggtaaaagatattccgatctgtgactgtaatctgatttctacctct 682
Query: 483 aatcacctggcctttgcttcctgataaatttgtttgttgtataagtagagcggtctctag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aatcacctggcctttgcttcctgataaatttgtttgttgtataagtagagcggtctctag 742
Query: 543 taaggatatacctcagtatatccca 567
|||||||||||||||||||||||||
Sbjct: 743 taaggatatacctcagtatatccca 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_l23.g1 MSMg01no355_l23.g1 CHROMAT_FILE:
MSMg01no355_l23.g1 PHD_FILE: MSMg01no355_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:17 2005
(455 letters)
>mm_chr11_76925386_76926241
Length = 856
Score = 824 bits (426), Expect = 0.0
Identities = 435/438 (99%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 19 aagttactcagaggttaagtgcattggttgctcttgcagaggacccacattcagttccca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 aagttactcagaggttaagtgcattggttgctcttgcagaggacccacattcagttccca 797
Query: 79 gcacccacaccagatggttcccagctgcctgaaactccagttcccagggttctaacacaa 138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 796 gcacccacaccagatggttcccagctgcctgaaactccagttcccagggttctaacgcaa 737
Query: 139 tccattgtcttctatgggcactgcccacaagaagtacacgtatagataagcaggcacaca 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tccattgtcttctatgggcactgcccacaagaagtacacgtatagataagcaggcacaca 677
Query: 199 tacatatacatgaattataattttatcttaagtcccaattctgaaacctatgaaagaaaa 258
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tacatatacacgaattataattttatcttaagtcccaattctgaaacctatgaaagaaaa 617
Query: 259 cttgttctgattcatcctggatacatccgttggccaaagaggtagcacgtgccagaatca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cttgttctgattcatcctggatacatccgttggccaaagaggtagcacgtgccagaatca 557
Query: 319 tctgagagtcgcagcaataaaaaaaaataatgttaaaggctcccgtctgtataatggata 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tctgagagtcgcagcaataaaaaaaaataatgttaaaggctcccgtctgtataatggata 497
Query: 379 cttgctccatgttcgctttgtcttctt-aaaggtaaataaggccagataaggtcattcat 437
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 496 cttgctccatgttcgctttgtcttctttaaaggtaaataaggccagataaggtcattcat 437
Query: 438 gctcgaagtcccagaact 455
||||||||||||||||||
Sbjct: 436 gctcgaagtcccagaact 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 856
Length adjustment: 10
Effective length of query: 445
Effective length of database: 846
Effective search space: 376470
Effective search space used: 376470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
