Query= MSMg01no356_j09.b1 MSMg01no356_j09.b1 CHROMAT_FILE:
MSMg01no356_j09.b1 PHD_FILE: MSMg01no356_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:21 2005
(459 letters)
>mm_chr11_24920153_24921012
Length = 860
Score = 874 bits (452), Expect = 0.0
Identities = 458/460 (99%), Gaps = 1/460 (0%)
Strand = Plus / Plus
Query: 1 agtaaagatggaaggagagaaccataaaatagctgttctcttgactcagtatgcatacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaaagatggaaggagagaaccataaaatagctgttctcttgactcagtatgcatacca 260
Query: 61 tggtatgggcatctacacataggcttatcatgcatgtgtaaacacaaactaataaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtatgggcatctacacataggcttatcatgcatgtgtaaacacaaactaataaaataa 320
Query: 121 cccccttgaatatgtatgctaaaattaatgatgcacagaatataaataggcattttctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccccttgaatatgtatgctaaaattaatgatgcacagaatataaataggcattttctga 380
Query: 181 atagtagatcacatttttttt-cataaaagctatgcagatttgggaaaagagtgtttact 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagtagatcacatttttttttcataaaagctatgcagatttgggaaaagagtgtttact 440
Query: 240 agtgattttcaagtcccatgaaagttttcagcaaaactagaagtatgcattcatgagaaa 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgattttcaagtcccatgaaagttttcagcaaaactagaagtatgcattcatgagaaa 500
Query: 300 aggaaaaagcagtcaaatctgagtaatcactgcaagggttgagatggcttaactagtgtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaaaaagcagtcaaatctgagtaatcactgcaagggttgagatggcttaactagtgtt 560
Query: 360 gctcccatgtcctctccccacatccacgataaccctaaacctgcaggccatcatccatgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctcccatgtcctctccccacatccacgataaccctaaacctgcaggccatcatccatgt 620
Query: 420 ttgcagtcctgatgtacaagctaatagccactggagaggg 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgcagtcctgatgtacaagctaatagccactggagaggg 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 860
Length adjustment: 10
Effective length of query: 449
Effective length of database: 850
Effective search space: 381650
Effective search space used: 381650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_j09.g1 MSMg01no356_j09.g1 CHROMAT_FILE:
MSMg01no356_j09.g1 PHD_FILE: MSMg01no356_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:21 2005
(429 letters)
>mm_chr11_25118933_25119761
Length = 829
Score = 806 bits (417), Expect = 0.0
Identities = 426/429 (99%)
Strand = Plus / Minus
Query: 1 taaccctgtgacattgaactgagctataaaacatatccacatataatcagctagtgaata 60
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 taaccccgtgacattgaacagagctataaaacatatccacatataatcagctagtgaata 570
Query: 61 aaacttgattgacttaagagacaaactggaaaacaaacaaacacaagacaacaacaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aaacttgattgacttaagagacaaactggaaaacaaacaaacacaagacaacaacaaaaa 510
Query: 121 cttgactagtttgttttgatcagctgattctcacaaggaagatccactctcattgggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cttgactagtttgttttgatcagctgattctcacaaggaagatccactctcattgggctc 450
Query: 181 tgagtctatgtctggagctcagtgcttatttcatcctcttgatgattttcaattcaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgagtctatgtctggagctcagtgcttatttcatcctcttgatgattttcaattcaaact 390
Query: 241 ctgaagtttctaaaacaaaaatatcaaaatagtgtagaataataatgtgcatcatgactt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctgaagcttctaaaacaaaaatatcaaaatagtgtagaataataatgtgcatcatgactt 330
Query: 301 cagggctatgttggcctgttgctcagtgaaattagagaaactatcagaagaaatggagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cagggctatgttggcctgttgctcagtgaaattagagaaactatcagaagaaatggagtt 270
Query: 361 cctagagaatttcttacaaggaagagtttgtgaggaaagacctgcttgggggcagctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cctagagaatttcttacaaggaagagtttgtgaggaaagacctgcttgggggcagctact 210
Query: 421 gaagtttaa 429
|||||||||
Sbjct: 209 gaagtttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
