XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGGGAACTTTTCAAATGGTATGTAAATGCTAGTGTCCAGAGAGGTGGAG
TGGGTTGTTGGTTGTTTGCATCCCTGGTAGTTTGTTGAGTAGTCATACAC
AAAGAAACCACAAGAAGAAATTAGATATCCTGATAGCAAAGGTAAAACTT
AGCTCAAGGCGTCCAATGCCCCTAATCAATAGGAAGTATTCTAACAATAA
AGACTTTCCCTTTCTCCTCTATCTTTTTTCTCTCCTATTTAGTGTTAGGG
GTTGAAAAGATGGAAGAAAATGGATGGAGAAGGGTGGGAGAAAGAACAGC
CAACAAAGTAGCCAAAGTCTGGAATACAATATAGTTTTTTAATTTACAAA
ATGAGATAGAAATTTTAGATATATTAGCAATGACCATTATTTGTAATCTA
TTTTGAAATCCTCATTGTAGAAAAAGCAACTAACACACATCTACAAACAG
CACAGTAGATTCACACCTTTGAGCCGTAGCAAAATAGGGCTTTTGATTAA
AAGGCTGATTTTTTTTTTGTATATAGGGCTAGGTAAAACAATAGATTTTT
TTTTTATCCTATGAATAGTACCCTTACCTTTATATTTTGAAAATAACCAT
GAAAATTAATCTTTCCCGGCTTATTAAACATTACCGCACTGGGTTGCTCA
ATGCTCCACTTGTACATTCATGCCTTCTTTAACCTCCCTTTTGCTAGCGA
CCTTTC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTCTGCCATCAGCATCTCCAGCCAACACCAGG
GAAAACCAAATGCCTAAAGGACAACATAAAAACACAATCAACCCAGGGCA
CTATGGCACGACCAGAGCCCAACTATCCTGCTACAACAAACCCTGGATAT
CCTAATGACACTGAAGCACAAGAAGAGGATCTTAAAGCCACTCTTTTAAA
AATAGAAGCCTTTAAAGAGGACATGAATAAAATCCCTTAAGGAAATGTAG
GAAAATACATTCAAACAAGTAGAGACATTAAAAGAGGAAGGAAATAAATA
TAAAGAAGTACAGGTAAATATGATCAAACAGGTGAAAGATATGAAGAAAA
CTGTCCAAGATCTGAAAAGGAAATGGAAGCAATAAAGAAAACACAAACTG
GAGCAATCCTGGCAATGGAAAACCTAGGANAGAGAACAGGAACTACAGAC
ATAAGCACCACCAACAGAATACAGGAAATGGAAGAGAAAATCTTGGATAT
AGAAAATAGATAGAAATCTATATATCTGTCCAAGAAAATGCAAATCTAAA
AATTTCATGACACAAAACATCCCGGAAAAGTGAATGCTTTGAAAAGACCA
AGCTAAGAAAATANGAATAAGAGGAGAATAAGAGGAGGGGGGANNNGTGG
TGNNTTNNNTNTTTCTCTTCTTNCTCCTTTNCCCTCTCTTTTTCCGTTCT
CCCCCCTTCTCTTTCCTCTCTCCGTTCTT

Query= MSMg01no357_k21.b1 MSMg01no357_k21.b1 CHROMAT_FILE:
MSMg01no357_k21.b1 PHD_FILE: MSMg01no357_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:44 2005
         (483 letters)



>mm_chr11_30647052_30647934
          Length = 883

 Score =  928 bits (480), Expect = 0.0
 Identities = 480/480 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgggaacttttcaaatggtatgtaaatgctagtgtccagagaggtggagtggg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgggaacttttcaaatggtatgtaaatgctagtgtccagagaggtggagtggg 263

                                                                       
Query: 64  ttgttggttgtttgcatccctggtagtttgttgagtagtcatacacaaagaaaccacaag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgttggttgtttgcatccctggtagtttgttgagtagtcatacacaaagaaaccacaag 323

                                                                       
Query: 124 aagaaattagatatcctgatagcaaaggtaaaacttagctcaaggcgtccaatgccccta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagaaattagatatcctgatagcaaaggtaaaacttagctcaaggcgtccaatgccccta 383

                                                                       
Query: 184 atcaataggaagtattctaacaataaagactttccctttctcctctatcttttttctctc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atcaataggaagtattctaacaataaagactttccctttctcctctatcttttttctctc 443

                                                                       
Query: 244 ctatttagtgttaggggttgaaaagatggaagaaaatggatggagaagggtgggagaaag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctatttagtgttaggggttgaaaagatggaagaaaatggatggagaagggtgggagaaag 503

                                                                       
Query: 304 aacagccaacaaagtagccaaagtctggaatacaatatagttttttaatttacaaaatga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacagccaacaaagtagccaaagtctggaatacaatatagttttttaatttacaaaatga 563

                                                                       
Query: 364 gatagaaattttagatatattagcaatgaccattatttgtaatctattttgaaatcctca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gatagaaattttagatatattagcaatgaccattatttgtaatctattttgaaatcctca 623

                                                                       
Query: 424 ttgtagaaaaagcaactaacacacatctacaaacagcacagtagattcacacctttgagc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgtagaaaaagcaactaacacacatctacaaacagcacagtagattcacacctttgagc 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)