Query= MSMg01no357_m08.b1 MSMg01no357_m08.b1 CHROMAT_FILE:
MSMg01no357_m08.b1 PHD_FILE: MSMg01no357_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:51 2005
(333 letters)
>mm_chr11_100419101_100419833
Length = 733
Score = 598 bits (309), Expect = e-175
Identities = 324/331 (97%), Gaps = 5/331 (1%)
Strand = Plus / Plus
Query: 5 gaattctacg--ctttccctccctcgttctttctgagacagggtttctctgtatagccct 62
|||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctacgcac---ccctccctcattctttctgagacagggtttctctgtatagccct 262
Query: 63 ggccctggctgtcctggaactcacttttgtagaccaggctggccttgaactcagaaatct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggccctggctgtcctggaactcacttttgtagaccaggctggccttgaactcagaaatct 322
Query: 123 gcctgcctctgcctcctgagtgctgggattaaaggcatgcgtcaccaccgctcggctccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcctgcctctgcctcctgagtgctgggattaaaggcatgcgtcaccaccgctcggctccc 382
Query: 183 tccctcatttttgtcagccacttagagactagccagtgacttgttcaggaggtttctagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tccctcatttttgtcagccacttagagactagccagtgacttgttcaggaggtttctagg 442
Query: 243 tacgcattccagtgctcatccattttttgggtggatggagatttgatttatgtgccttcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tacgcattccagtgctcatccattttttgggtggatggagatttgatttatgtgccttcc 502
Query: 303 tgtcactggtagtttgttgttgttttcctca 333
|||||||||||||||| ||||||||||||||
Sbjct: 503 tgtcactggtagtttgctgttgttttcctca 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_m08.g1 MSMg01no357_m08.g1 CHROMAT_FILE:
MSMg01no357_m08.g1 PHD_FILE: MSMg01no357_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:51 2005
(313 letters)
>mm_chr11_100592176_100592888
Length = 713
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 1 aggttgtcccttttggtgatggttggtgctcctcatatctgggtgaagtggcagagcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aggttgtcccttttggtgatggttggtgctcctcatatctgggtgaagtggcagagcaag 454
Query: 61 cacatagtgagaacccctccagtcctagcagctggtccttgaaacagttcctatgaactg 120
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 453 cacatagtgagaacccctccagtcctagcagttggtccttgcaacagttcctatgaactg 394
Query: 121 ttcaccagttcatagtccccagctgcctgatgctgcacttgagcgaaatagtgggcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttcaccagttcatagtccccagctgcctgatgctgcacttgagcgaaatagtgggcacat 334
Query: 181 ttggtgtctactctggagtttactcagagtgtggagaggtactggctgtaatcattgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttggtgtctactctggagtttactcagagtgtggagaggtactggctgtaatcattgtct 274
Query: 241 ggtttgggtatttagagttctctagtcaaacctttctggactttgggctgagagtccatg 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 ggtttgggtatttagagttctctagtcaatcctttctggactttgggctgagagtccatg 214
Query: 301 tcaagtcccaggt 313
|||||||||||||
Sbjct: 213 tcaagtcccaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
