XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGAC
CCATACCTAAGAATAATAAGAGCAAATTACAGCAACTCAACAGTCAATAT
CAAATTAAATGGACAGACACTTGAAGCAATCCCAGTATAATTAGGGACAA
GACAAAGATGCCCACTCTTATCATATCTATTCAAATTGGAGAAGTTCTCA
GAAAATGGAGAGATTTCTCATGCTCATGGATTGGCAGAATTAACATAGTA
AAAATGGCCGTCCTACTAAAGGCAATCAACAGATTCAAAACAATCCAGAT
CAAAATCCCAACAAAATTCTTCAAAGACATGGAAAAACCAATTCTCAATT
TCACCTGGAAAAGCAAAAAACCAAGGAGAAAACAATTCGTAACAATACAA
GAATGGCTGGGGGAATCACCATCCTTGACCTCAAGCTGTAGTAGAGAGCA
CTAGTGATTAAAAACTGCATGGTACTGTTACAGGGTCAGACATGGAATAA
AACTGAAGAACCCAGAAGAAAGCNCATGGCTATGCTCACTTGATCTTTGA
CAAGAACCATACACCTATATATGTATGCTTATAATTTCACTATATAAAAT
ATAAAAAAAAAAGGGAAAATAGAAAAAACCTTTATATATGNGGCTGGGCT
AACGGCAGCCCGGTTGGTAAAAAAGGAAAAAAACCCAATTTTCCCCTTTT
CCCCATCCCAGTTGGAGGGGGCAAAGACCCCCCTTAAACCCAAACCTTA

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCAGAGAGGAAAAAGCTCAGAGTCTAATATATTGAACC
CATTGATTATCCTAGCTCTACTCCACCTTTTTCTTCTTGCCACACCTTGC
CAAGTTCAGCTTCTGGCTTGGGCTACAGCTTTGACTCCCCAAGAACATAC
ACAGATTTGAAATATGCTTGCTTGTTTCAACTTTTAGAAACATATTTTTA
ACAAAATTTATGATAAAGCACAAAATTAAATTTGTTCAGAAAAGTTGTAC
TTCTAATATCATTCCTGTGTCCATTCCTTTCTTCCCTCTCCATAGGCATT
AACTTTTATTAGACATAAGTTTATCAAATATTTCTTTTTGTAAATACTAA
AAGAGCACATTTTATTTATATTCATAGACTACTATTATATAGTATAATTT
TATTTTTAACTTTCTGTTGCATTTAGTTAATAAATGAAGAAATACTAATA
GTGATTATATTTCCTATTTTATAAATGATTTCCAAATATTTAAAAACATG
TTGTTACAATGGAATATTTGTAGGAATATACACTTGAATAGTAACATGAG
GGAAACTAAAGTGCACTCATGAATTTTTAATGGATGGTTTTGGGGAATTT
GAAAGCCCGAAGGACCCCCCATTCCTAAGACCTGGCCCAGGGTGAATTCA
CGTGTCGGATAAAAATTCTATAAAAAAAGGCACCCCGAA

Query= MSMg01no358_h20.g1 MSMg01no358_h20.g1 CHROMAT_FILE:
MSMg01no358_h20.g1 PHD_FILE: MSMg01no358_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:46 2005
         (464 letters)



>mm_chr11_27117081_27117944
          Length = 864

 Score =  890 bits (460), Expect = 0.0
 Identities = 463/464 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagagaggaaaaagctcagagtctaatatattgaacccattgattatcctagctctactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagaggaaaaagctcagagtctaatatattgaacccattgattatcctagctctactc 260

                                                                       
Query: 61  cacctttttcttcttgccacaccttgccaagttcagcttctggcttgggctacagctttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacctttttcttcttgccacaccttgccaagttcagcttctggcttgggctacagctttg 320

                                                                       
Query: 121 actccccaagaacatacacagatttgaaatatgcttgcttgtttcaacttttagaaacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actccccaagaacatacacagatttgaaatatgcttgcttgtttcaacttttagaaacat 380

                                                                       
Query: 181 atttttaacaaaatttatgataaagcacaaaattaaatttgttcagaaaagttgtacttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttaacaaaatttatgataaagcacaaaattaaatttgttcagaaaagttgtacttc 440

                                                                       
Query: 241 taatatcattcctgtgtccattcctttcttccctctccataggcattaacttttattaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatatcattcctgtgtccattcctttcttccctctccataggcattaacttttattaga 500

                                                                       
Query: 301 cataagtttatcaaatatttctttttgtaaatactaaaagagcacattttatttatattc 360
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 cataagtttatcaaatatttctttttgtaaatactaaaggagcacattttatttatattc 560

                                                                       
Query: 361 atagactactattatatagtataattttatttttaactttctgttgcatttagttaataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagactactattatatagtataattttatttttaactttctgttgcatttagttaataa 620

                                                       
Query: 421 atgaagaaatactaatagtgattatatttcctattttataaatg 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgaagaaatactaatagtgattatatttcctattttataaatg 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)