Query= MSMg01no358_k07.b1 MSMg01no358_k07.b1 CHROMAT_FILE:
MSMg01no358_k07.b1 PHD_FILE: MSMg01no358_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:58 2005
(352 letters)
>mm_chr11_81231725_81232477
Length = 753
Score = 621 bits (321), Expect = 0.0
Identities = 342/349 (97%), Gaps = 1/349 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgtagattc-tccccacttcctgaccggaccagacccttatgatctgcctgct 63
|||||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtagatacatacccacttcctcaccggaccagacccttatgatctgcctgct 264
Query: 64 cctgctcccactcccctcctctcatagactcacctgccatcccctaacatgccatcttcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctgctcccactcccctcctctcatagactcacctgccatcccctaacatgccatcttcc 324
Query: 124 ttcattccttgctaccatgctttaccttctgcttcggctgctctagatctttatctattc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcattccttgctaccatgctttaccttctgcttcggctgctctagatctttatctattc 384
Query: 184 agcgagctcccatctgcaacccagcaggaaccccagcacctccatcatcctttcaggtgg 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcgagctcccatctgcaccccagcaggaaccccagcacctccatcatcctttcaggtgg 444
Query: 244 gcttggttattcttttgctggtgtttctccttcatgtattaatcttaaaattatacttct 303
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 445 gcttggttattcttttgctggcgtttctccctcatgtattaatcttaaaattatacttct 504
Query: 304 gtctgctggacttatgctgacaatattactagggaaactattaaggata 352
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctgctggacttatgctgacaatattactagggaaactattaaggata 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 753
Length adjustment: 9
Effective length of query: 343
Effective length of database: 744
Effective search space: 255192
Effective search space used: 255192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_k07.g1 MSMg01no358_k07.g1 CHROMAT_FILE:
MSMg01no358_k07.g1 PHD_FILE: MSMg01no358_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:58 2005
(296 letters)
>mm_chr11_81430023_81430718
Length = 696
Score = 528 bits (273), Expect = e-154
Identities = 290/296 (97%)
Strand = Plus / Minus
Query: 1 attaaaaaagaaaaacaaattctcagacaagcttttcaatagctcttaaagaaaggcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attaaaaaagaaaaacaaattctcagacaagcttttcaatagctcttaaagaaaggcaca 437
Query: 61 ttcccatgctggcattaagaactgtcatgcttcatacacgttacacttacacatctacac 120
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttcacatgctggcattaaaaactgtcatgcttcatacacgttacacttacacatctacac 377
Query: 121 acacatataaacacacacataaaagaccaggaaaactattatttgttattgcaatctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 acacatataaacacacacataaaagaccaggaaaactattatttgttattgcaatctgac 317
Query: 181 ctcccacctctaggggcagtacgtcttatgtgcgcacgagagggcggngagtgggttgag 240
|||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 316 ctccaacctataggggcagtacttcttatgtgcgcacgagagggcggggagtgggttgag 257
Query: 241 tagtactcctggtgctgagtaggagtcagaggtcatctgagaggtacaggagctga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tagtactcctggtgctgagtaggagtcagaggtcatctgagaggtacaggagctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
