Query= MSMg01no359_g20.b1 MSMg01no359_g20.b1 CHROMAT_FILE:
MSMg01no359_g20.b1 PHD_FILE: MSMg01no359_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:55 2005
(449 letters)
>mm_chr11_14501852_14502700
Length = 849
Score = 862 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus
Query: 4 ggaattcattcactgacttagccattccacaatgcatcacatttcaaaatatatcttttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattcactgacttagccattccacaatgcatcacatttcaaaatatatcttttg 263
Query: 64 ggcaaatacaggtacatgcagtttttaaatgtaaaatgtgtacaaatagtatgaaacatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggcaaatacaggtacatgcagtttttaaatgtaaaatgtgtacaaatagtatgaaacatt 323
Query: 124 ggacaaaaattctgggcaggggcttacattaaaagtcatatgcattacgtccctgataag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggacaaaaattctgggcaggggcttacattaaaagtcatatgcattacgtccctgataag 383
Query: 184 gaaagaatgatgtcaaggttgtgcatcaaatcagattgtcagtgagagaagagctatagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaagaatgatgtcaaggttgtgcatcaaatcagattgtcagtgagagaagagctatagc 443
Query: 244 acattgtggcactaatagttagaatcagcataaatcatttggcattatcacttcaacgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acattgtggcactaatagttagaatcagcataaatcatttggcattatcacttcaacgta 503
Query: 304 atgtaaagactttttgttgtttttagttgttgtttttgaaagaacaaataatagtagtca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atgtaaagactttttgttgtttttagttgttgtttttgaaagaacaaataatagtagtca 563
Query: 364 taacttgctagagcaatgaaatattcactaaagtgtctaaaccacaaagatcatggcatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taacttgctagagcaatgaaatattcactaaagtgtctaaaccacaaagatcatggcatg 623
Query: 424 ccaagggggtgacacagctatgctcc 449
||||||||||||||||||||||||||
Sbjct: 624 ccaagggggtgacacagctatgctcc 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_g20.g1 MSMg01no359_g20.g1 CHROMAT_FILE:
MSMg01no359_g20.g1 PHD_FILE: MSMg01no359_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:55 2005
(370 letters)
>mm_chr11_14641339_14642108
Length = 770
Score = 658 bits (340), Expect = 0.0
Identities = 363/371 (97%), Gaps = 1/371 (0%)
Strand = Plus / Minus
Query: 1 actaaatcccttcaccgaactccttattgtgtctagtaattcctatattttgtagactta 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actaaatcccttcaccaaactccttattgtgtctagtaattcctatattttgtagactta 321
Query: 61 aaacacaattatatttacttaatataaccagatgttcttaaaaaagacagtttagtgtct 120
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 320 aaacacaattatatttacttaatataaccaaatgttcttaaaaaaaacagtttagtgtct 261
Query: 121 ttgacttgatatcaaacacttagataactgtagatgtccattaatttgcatgtctatatg 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 260 ttgacttgatatcaaatacttagataactgtagatgtccattaatttgcatgtctctatg 201
Query: 181 ttttatataaaataaatttttgcttaagaataacagtctgataaaaaaattggtctaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttttatataaaataaatttttgcttaagaataacagtctgataaaaaaattggtctaagt 141
Query: 241 gagtgtttaatgttaaattgactttaaagtgaactgattgttggtaataatatgtaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagtgtttaatgttaaattgactttaaagtgaactgattgttggtaataatatgtaaaat 81
Query: 301 gtagg-ttttttttaaatgtatgcatcccaaattttctaaaactctcatatttgtanaaa 359
||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 80 gtaggtttttttttaaatgtatgcatcccaaattttctaaaactcttatatttgtagaaa 21
Query: 360 aaaattgagat 370
|||||||||||
Sbjct: 20 aaaattgagat 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
