Query= MSMg01no359_h01.b1 MSMg01no359_h01.b1 CHROMAT_FILE:
MSMg01no359_h01.b1 PHD_FILE: MSMg01no359_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:56 2005
(470 letters)
>mm_chr11_105950320_105951189
Length = 870
Score = 640 bits (331), Expect = 0.0
Identities = 362/373 (97%), Gaps = 2/373 (0%)
Strand = Plus / Minus
Query: 98 atgaaaacttttaaaagtacagtatttaatttttttttatttaaaagttaaatatagctg 157
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 870 atgaaaacttttaaaagtacagtatttaa--tttttttatttaaaagttaaatatagccg 813
Query: 158 ggcgtggtggcgcacacctttaatcccagcacttgagaggcagaggcaggcggatttctg 217
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 812 ggcgtggtggcgcacacctttaatcccagcacttgggaggcagaggcaggcggatttctg 753
Query: 218 agttcgaggccagcctggtctacagagtgagttccatgatagccggggctatacagagaa 277
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 752 agttcgaggccagcctggtctacagagtgagttccaggatagccagggctatacagagaa 693
Query: 278 accctgtctcaaaaaaacaaaaagttaaatgtgtattgttctattactaggagatataac 337
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 accctgtctcaaaaaaccaaaaagttaaatgtgtattgttctattactaggagatataac 633
Query: 338 aatctaccaaagttaatggctcaaatgcatattacaaagtaaagcactgcttgctagtaa 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aatctaccaaagttaatggctcaaatgcatattacaaagtaaagcactgcttgctagtaa 573
Query: 398 gaatcaatagaatccccacttcacaccctttgtgtgtgcgcatctgcaggtcttgtgcat 457
|||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 572 gaatcaatagaatcaccactttacaccctttgtgtgtatgcatctgcaggtcttgtgcat 513
Query: 458 gtgcctctctaag 470
|||||||||||||
Sbjct: 512 gtgcctctctaag 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_h01.g1 MSMg01no359_h01.g1 CHROMAT_FILE:
MSMg01no359_h01.g1 PHD_FILE: MSMg01no359_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:56 2005
(123 letters)
>mm_chr11_105792472_105792992
Length = 521
Score = 215 bits (111), Expect = 9e-61
Identities = 120/123 (97%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 1 catacatatatgaagaaggactccccagaatcttgactcatcccagacctccttcccagt 60
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 catacatatatga-gaaggactccccaga-tcttgactcatcccagacctccttcccagt 258
Query: 61 ttgtttttaaacccactgtgtccagttagtgttgcaagaatgtgctgagtgaaagagcaa 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttgtttttaaacccattgtgtccagttagtgttgcaagaatgtgctgagtgaaagagcaa 318
Query: 121 cct 123
|||
Sbjct: 319 cct 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 123
Length of database: 521
Length adjustment: 8
Effective length of query: 115
Effective length of database: 513
Effective search space: 58995
Effective search space used: 58995
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
