Query= MSMg01no359_h16.b1 MSMg01no359_h16.b1 CHROMAT_FILE:
MSMg01no359_h16.b1 PHD_FILE: MSMg01no359_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:59 2005
(527 letters)
>mm_chr11_84114508_84115435
Length = 928
Score = 998 bits (516), Expect = 0.0
Identities = 522/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Minus
Query: 5 gaattcc-atgtctgtggtaaagagagtgagcttgttagcggttcagaagcctagcccaa 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gaattccaatgtctgtggtaaagagagtgagcttgttagcggttcagaagcctagcccaa 669
Query: 64 ttctgacacacacccagggcctggctcccgacatgtgtaccttagctccgacagcatctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttctgacacacacccagggcctggctcccgacatgtgtaccttagctccgacagcatctc 609
Query: 124 ccagccacagtgtttattcatgggcactcagagtctatccccaagtatcaattttactct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ccagccacagtgtttattcatgggcactcagagtctatccccaagtatcaattttactct 549
Query: 184 ctaagctcctgatttcttttcctaaagccctagggttctctctaagctgctcatacttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctaagctcctgatttcttttcctaaagccctagggttctctctaagctgctcatacttct 489
Query: 244 ccactgactcctgcttcctatctgaagttattgattgatgtatacctgcactctgctgga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ccactgactcctgcttcctatctgaagttattgattgatgtatacctgcactctgctgga 429
Query: 304 tttcctgacatcaataacacaagcgagttgtatagtccacaacatttcctaaagcatttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tttcctgacatcaataacacaagcgagttgtatagtccacaacatttcctaaagcatttc 369
Query: 364 agaaaaatcttagctgtttagcttgcagggtaggctctctagcttctctatagactagac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agaaaaatcttagctgtttagcttgcagggtaggctctctagcttctctatagactagac 309
Query: 424 aagtatgaggggaaacaaaataccaaatgccttgagtttaggaagccctttctagaacac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aagtatgaggggaaacaaaataccaaatgccttgagtttaggaagccctttctagaacac 249
Query: 484 aaaatgttacctgctcattcttacaaatgagcagtacttgaata 527
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 248 aaaatgttacctgctcattcttataaatgagcagtacttgaata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space: 474606
Effective search space used: 474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_h16.g1 MSMg01no359_h16.g1 CHROMAT_FILE:
MSMg01no359_h16.g1 PHD_FILE: MSMg01no359_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:59 2005
(435 letters)
>mm_chr11_83916696_83917528
Length = 833
Score = 808 bits (418), Expect = 0.0
Identities = 428/432 (99%), Gaps = 2/432 (0%)
Strand = Plus / Plus
Query: 1 attttccttctactagcttttgagggatctgtttagtcctaatatgacaataagatcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttccttctactagcttttgagggatctgtttagtcctaatatgacaataagatcaga 260
Query: 61 gcagtctattgaagacagtttccagaagaggaagactatggggtggctatgcactcacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagtctattgaagacagtttccagaagaggaagactatggggtggctatgcactcacac 320
Query: 121 tgcgtgaacaaatcgcccacctaagtatggcaggctgggctctaggttgacacctctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcgtgaacaaatcgcccacctaagtatggcaggctgggctctaggttgacacctctctc 380
Query: 181 caagagcactgcagatgacttcagatggcaagttagagcttgacatcatttccacatttt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 caagagcactgcagatgacttcagatggcaagttagagcttgacatcacttccacatttt 440
Query: 241 ccttaattccatggctaagtaaggaacatagtttgaatggacatatgcatatacaaccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttaattccatggctaagtaaggaacatagtttgaatggacatatgcatatacaaccat 500
Query: 301 tacccagccctcagcctgggaaataaacttttgttggaagacagttgtatctatttgttt 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tacccagccctcagcctgggaaataaacttttgttggaagacagctgtatctatttgttt 560
Query: 361 tgtttatatatcatctatgctttgtttgtttgtttgagacaggctttcacagtacaaccc 420
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtttatatatcatctatgct--gtttgtttgtttgagacaggctttcacagtacaaccc 618
Query: 421 aggcctctctaa 432
||||||||||||
Sbjct: 619 aggcctctctaa 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 833
Length adjustment: 9
Effective length of query: 426
Effective length of database: 824
Effective search space: 351024
Effective search space used: 351024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
