Query= MSMg01no359_i18.b1 MSMg01no359_i18.b1 CHROMAT_FILE:
MSMg01no359_i18.b1 PHD_FILE: MSMg01no359_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:03 2005
(499 letters)
>mm_chr11_104281802_104282703
Length = 902
Score = 928 bits (480), Expect = 0.0
Identities = 493/498 (98%), Gaps = 3/498 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgt--gaggagaa-aaaataccatgagacaacgtgaaacttagtgtccaatac 61
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gaattcttgtgagaggagaataaaataccatgagacaacgtgaaacttagtgtccaatac 643
Query: 62 ataacaatgtagggtaaacgctgtgtgatagaaatgaagtaggaagagattttagcagaa 121
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ataacaatgtagggtaaatgctgtgtgatagaaatgaagtaggaagagattttagcagaa 583
Query: 122 aaatggaattagaaaaaaaatggatattagaaccatgaatggtagtttagattttgatag 181
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agatggaattagaaaaaaaatggatattagaaccatgaatggtagtttagattttgatag 523
Query: 182 gcagatttttggagaaaattggaaatatggtctaaagaggttgatcaatacaagcagatg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gcagatttttggagaaaattggaaatatggtctaaagaggttgatcaatacaagcagatg 463
Query: 242 gaataacacacagtggaaagacagttcaagagttacaggactgatgtctagggaacattt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaataacacacagtggaaagacagttcaagagttacaggactgatgtctagggaacattt 403
Query: 302 tggagaccagtcagaatgggtagaggtgatatatatactataagaggaaaggagataaat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tggagaccagtcagaatgggtagaggtgatatatatactataagaggaaaggagataaat 343
Query: 362 tctaggtgtcactcagccacacctcctaccccagcttccagcatctttttagatagtatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tctaggtgtcactcagccacacctcctaccccagcttccagcatctttttagatagtatt 283
Query: 422 ttatgttttctcatttagtcttccatgtgcttagagctgatattttttacaagcatgtgc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ttatgttttctcatttagtcttccatgtgcttagagctgatattttttacaagcatgtgc 223
Query: 482 ttgctgcttatgaaaata 499
||||||||||||||||||
Sbjct: 222 ttgctgcttatgaaaata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 902
Length adjustment: 10
Effective length of query: 489
Effective length of database: 892
Effective search space: 436188
Effective search space used: 436188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_i18.g1 MSMg01no359_i18.g1 CHROMAT_FILE:
MSMg01no359_i18.g1 PHD_FILE: MSMg01no359_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:04 2005
(365 letters)
>mm_chr11_104115118_104115882
Length = 765
Score = 690 bits (357), Expect = 0.0
Identities = 363/365 (99%)
Strand = Plus / Plus
Query: 1 caagacagctagggctaccaagtagagagagtctgtctcaaaacaacaacaaaatagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagacagctagggctaccaagtagagagagtctgtctcaaaacaacaacaaaatagctt 260
Query: 61 agaagcatggcatacatgggtatgtacatgtgtctgtgtaaaacatgtttacaacataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 agaagcatggcatacatgggtatgtacatgtgtctgtgtaaaacatgtttataacataag 320
Query: 121 acatagttgaacccgggaaccaaatgttcttgtagacccacagatggacgggataggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatagttgaacccgggaaccaaatgttcttgtagacccacagatggacgggataggtga 380
Query: 181 gcaaggagaaatgggttagtgagtttaagtccctaccttaacatagatgggaacgaacga 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaaggagaaatgggttagtgtgtttaagtccctaccttaacatagatgggaacgaacga 440
Query: 241 tctacactgcccagtggggaactgcatgtcatgtgacaacatagatggaactatctgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctacactgcccagtggggaactgcatgtcatgtgacaacatagatggaactatctgatt 500
Query: 301 tataatcccaaatcctttttatgtcaaaaatagccccactgctattttttcctcttggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataatcccaaatcctttttatgtcaaaaatagccccactgctattttttcctcttggtg 560
Query: 361 ctttc 365
|||||
Sbjct: 561 ctttc 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
