Query= MSMg01no361_e01.b1 MSMg01no361_e01.b1 CHROMAT_FILE:
MSMg01no361_e01.b1 PHD_FILE: MSMg01no361_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:14 2005
(520 letters)
>mm_chr11_92776213_92777133
Length = 921
Score = 922 bits (477), Expect = 0.0
Identities = 504/513 (98%), Gaps = 1/513 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgttccttaatgctacctggttttataagaggatccatattttgttctgacc 64
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 717 gaattctctgttggttaatgctacctggttttataagaggacccatattttgttctgacc 658
Query: 65 tcatcattttttgggcaattagccctcttgagtaaatctgctctttgtcattctagttga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tcatcattttttgggcaattagccctcttgagtaaatctgctctttgtcattctagttga 598
Query: 125 ctgtca-tttttttctatagatcattaaggtgtaattgcccacacatcattagacacgtg 183
|||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 597 ctgtcattttttttccatagatcattaaggtgtaattgcccacatatcattagacacgtg 538
Query: 184 aggagagccactaagggaagaattcaggaagcccctaagtcaaattcccacagcctttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aggagagccactaagggaagaattcaggaagcccctaagtcaaattcccacagcctttgg 478
Query: 244 gatgatataccaactgtccccataccatatagctctcatgccaaatgagatcactgtttc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 477 gatgatataccaactgtccccataccatatagctctcatgccaaatgagatcaccgtttc 418
Query: 304 aaagtaggcttttaaaatcttcccttaaggactttatcctgtcttaacatgtagtattac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaagtaggcttttaaaatcttcccttaaggactttatcctgtcttaacatgtagtattac 358
Query: 364 cttcctccatgattagtatgactttctgtccttagaaccaaggtgagccatgaaaatgct 423
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 357 cttcctccatgattagtatgactttctgtccttagaaccaaggtgagccgtgaaaatgct 298
Query: 424 attattgaagctaaggggaaaagttgctgaagcatgtaaggttgcaactcaatctatctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 attattgaagctaaggggaaaagttgctgaagcatgtaaggttgcaactcaatctatctc 238
Query: 484 agaataatcaaggggaaatcttatgacaatgtg 516
||||||||||||||||||||||| |||||||||
Sbjct: 237 agaataatcaaggggaaatcttaggacaatgtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space: 464610
Effective search space used: 464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_e01.g1 MSMg01no361_e01.g1 CHROMAT_FILE:
MSMg01no361_e01.g1 PHD_FILE: MSMg01no361_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:14 2005
(496 letters)
>mm_chr11_92597698_92598591
Length = 894
Score = 814 bits (421), Expect = 0.0
Identities = 476/495 (96%), Gaps = 3/495 (0%)
Strand = Plus / Plus
Query: 1 cttactctggtagtttggggaggcaagtacaatggggcgaagggtggcctggcaaagatg 60
|||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 201 cttaatctggtagtttggggaggcaagtacaatggggagaagggtggcctgggaaagatg 260
Query: 61 ggcagagtcaacatgaaggaaataatcaatacttctcacacggaaatggagttccaactt 120
|||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ggcagagtcagcatgaatgaaataatcaatacttctcacacagaaatggagttccaactt 320
Query: 121 tagtagagctatttgggggtataaataaaaatatccacacctcgtgttcactctctttat 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtagagctatttggggttataaataaaaatatccacacctcgtgttcactctctttat 380
Query: 181 caggtaaccccaacattctatttcccaccataatcagatacagcagaagggtgccaccag 240
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 caggtaaccccatcattctatttcccaccataatca--tacagcagaagggtgccaccag 438
Query: 241 aagcagagtggatgccaacaccatgcgtttgaaattcccagcttacagcattatgatctc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aagcagagtggatgccaaccccatgcgtttgaaattcccagcttacagcattatgatctc 498
Query: 301 aataaatctctattctccataacttacccagtctcaagttttcagaaacaaacaaaaaac 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 aataaatctctattctccataacttagccagtctcaagttttcagaaacaaacaaaaaac 558
Query: 361 aaacaacagaagaactttttttttttttgagatagggtttctttctgtatagccctggat 420
||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||
Sbjct: 559 aaacaacagaagaactttttttttttt-gagatagggtttctctctgtatagccccggat 617
Query: 421 atcctggaactcactttgtagaccatgctgacctcaaactcagaaatctgcctgcctctg 480
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 618 atcctggaactcactttgtagaccaggctgaccgcaaactcagaaatctgcctgcctctg 677
Query: 481 ccattccgagtgctg 495
|||| || |||||||
Sbjct: 678 ccatcccaagtgctg 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 894
Length adjustment: 10
Effective length of query: 486
Effective length of database: 884
Effective search space: 429624
Effective search space used: 429624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
