Query= MSMg01no361_e07.b1 MSMg01no361_e07.b1 CHROMAT_FILE:
MSMg01no361_e07.b1 PHD_FILE: MSMg01no361_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:15 2005
(556 letters)
>mm_chr11_34867552_34868507
Length = 956
Score = 1054 bits (545), Expect = 0.0
Identities = 551/553 (99%), Gaps = 2/553 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaggaagcctagactctctccgaccctctcacccccattcccctccccttgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaattccaaggaagcctagactctctccgaccctctcacccccattcccctccccttgat 697
Query: 65 ttatttatcttttcataagctgtcccacacaacttgacttcacatctatatagtaaaaaa 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 696 ttatttatcttttcataagctgtcccacacaacttgacttcacatctatatagt-aaaaa 638
Query: 125 aaaaacttagaaatattgtacaaagatgttctaaaattaaactccctgtctgttacctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aaaaacttagaaatattgtacaaagatgttctaaaattaaactccctgtctgttacctga 578
Query: 185 ttggttccatttgggccacttagctatggatattagggcagacagcacagcagaccatac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttggttccatttgggccacttagctatggatattagggcagacagcacagcagaccatac 518
Query: 245 tgtccaagcttgtccactgatgggccagctgagagctctttgagaagttcataggtcagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tgtccaagcttgtccactgatgggccagctgagagctctttgagaagttcataggtcagt 458
Query: 305 tagatagatgttatgatacctacttcttcgcttaacctatgaatttaaactga-tttttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 457 tagatagatgttatgatacctacttcttcgcttaacctatgaatttaaactgattttttc 398
Query: 364 acacgttggtgagcttgtgcccagccatgcacccacatctttaaaatgagctacagattg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acacgttggtgagcttgtgcccagccatgcacccacatctttaaaatgagctacagattg 338
Query: 424 tcatataaatctgccaacttggaagtgtatacttaaaaaatcccaaagaaccaattttca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tcatataaatctgccaacttggaagtgtatacttaaaaaatcccaaagaaccaattttca 278
Query: 484 acatgtcaaaggctgagctcatcagctcgccccaaacacttcgtgccctatccactgtga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 acatgtcaaaggctgagctcatcagctcgccccaaacacttcgtgccctatccactgtga 218
Query: 544 aggatccttaatt 556
|||||||||||||
Sbjct: 217 aggatccttaatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_e07.g1 MSMg01no361_e07.g1 CHROMAT_FILE:
MSMg01no361_e07.g1 PHD_FILE: MSMg01no361_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:15 2005
(476 letters)
>mm_chr11_34692259_34693134
Length = 876
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%)
Strand = Plus / Plus
Query: 1 tttgttcaattctgagccccattttttaatggggttatttgattttctgaagtccacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcaattctgagccccattttttaatggggttatttgattttctgaagtccacctt 260
Query: 61 cttgagttctttatatatgttggatattagtctcctatccgattgaagtgggaattcttg 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 cttgagttctttatatatgttggatattagtcccctatccgattgaagtgggaattcttg 320
Query: 121 cacagacagattagaaagagatgtaatctgtttcctattaaaatatgtcttagaaataag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagacagattagacagagatgtaatctgtttcctattaaaatatgtcttagaaataag 380
Query: 181 ggcatgtttggggaaaacaactcaagacaaaatgcgattgaataactttccacttgagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcatgtttggggaaaacaactcaagacaaaatgcgattgaataactttccacttgagct 440
Query: 241 tcaatatctaccttaccccatcttggtcaggcagtgattgctaagtcatattaataaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaatatctaccttaccccatcttggtcaggcagtgattgctaagtcatattaataaaaa 500
Query: 301 caagatagaaagttgcatgtcatgacacttatctttctattgcatacatcatcctgttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagatagaaagttgcatgtcatgacacttatctttctattgcatacatcatcctgttca 560
Query: 361 gcgaatttaaaacctgggcacacctttaatcccagcatttgggaggcagaggcaatgggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcgaatttaaaacctgggcacacctttaatcccagcatttgggaggcagaggcaatgggc 620
Query: 421 tctctgaattcaaagtcagcctggtctacaaaacaagttccaggacaatcatggct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctgaattcaaagtcagcctggtctacaaaacaagttccaggacaatcatggct 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
