Query= MSMg01no361_n10.b1 MSMg01no361_n10.b1 CHROMAT_FILE:
MSMg01no361_n10.b1 PHD_FILE: MSMg01no361_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:00 2005
(545 letters)
>mm_chr11_101233276_101234220
Length = 945
Score = 1033 bits (534), Expect = 0.0
Identities = 540/542 (99%)
Strand = Plus / Minus
Query: 4 ggaattcacaccgtgtgccaagcattgtgcaggggtgtgggaggactgtgctcagaccag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggaattcacaccgtgtgccaagcattgtgcaggggtgtgggaggactgtgctcagaccag 493
Query: 64 agaggtcctccattgctcttgaggttgcagacagtttgcagattgcacaggaatccggac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agaggtcctccattgctcttgaggttgcagacagtttgcagattgcacaggaatccggac 433
Query: 124 agtgagggtgtaagttacacaccgatccgtccaccctcagctcccctatattttccttct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agtgagggtgtaagttacacaccgatccgtccaccctcagctcccctatattttccttct 373
Query: 184 ctctcttctctagccacactgtctcattgcctgcccctaaatgaatcacggatgcttttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctctcttctctagccacactgtctcattgcctgcccctaaatgaatcacggatgcttttc 313
Query: 244 tcccaaagttcctctggtcaactccctggcttcttcaaatcttgtctcagactcactttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcccaaagttcctctggtcaactccctggcttcttcaaatcttgtctcagactcactttt 253
Query: 304 tcaataagacctactccaaccaatttaagttgcttctcactcctgacctgctatccacac 363
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcaataagacccactccaaccaatttaagttgcttctcactcctgacctgctatccacac 193
Query: 364 cccatcctggatggagtgatagttttccagctgttaagagtgtagttgtgggtgctcctt 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 192 cccatcctggatggagtgatagttttccagctggtaagagtgtagttgtgggtgctcctt 133
Query: 424 aactcttagccttttatgggcatgtctttgggctgaagacagctatcttggtcaatggta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aactcttagccttttatgggcatgtctttgggctgaagacagctatcttggtcaatggta 73
Query: 484 taccctatacctaagtatagcctgtttcccatgactagtctgtatcatgccataaaggct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 taccctatacctaagtatagcctgtttcccatgactagtctgtatcatgccataaaggct 13
Query: 544 gg 545
||
Sbjct: 12 gg 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_n10.g1 MSMg01no361_n10.g1 CHROMAT_FILE:
MSMg01no361_n10.g1 PHD_FILE: MSMg01no361_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:00 2005
(472 letters)
>mm_chr11_101072978_101073849
Length = 872
Score = 837 bits (433), Expect = 0.0
Identities = 463/473 (97%), Gaps = 1/473 (0%)
Strand = Plus / Plus
Query: 1 aattcag-gaaaccacatgatggctcacaggcatctgtaatgggatctgatgctctcttc 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aattcagagaaaccacatgatggctcacaggcatctgtaatgggatctgatgctctcttc 259
Query: 60 tggtgtgtctgaagacagctacagtgtacccacatactttaaataaataagtctttttaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggtgtgtctgaagacagctacagtgtacccacatactttaaataaataagtctttttaa 319
Query: 120 aaaatggaaataaaggatgcctgttctccaaaatcagttcatttggttatacggcaactt 179
|||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 320 aaaatggaaataaaggataccttttctccaaaatcagttcatttggttatactgcaactt 379
Query: 180 gaaataatgtctttgaacagtagagggtgctgtggatgtatttttgaatgttagcaactg 239
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 gaaataatgtctttgaacactagagggtgctgtggatgtaattttgaatgttagcaactg 439
Query: 240 catagtaggtagggctattagctggcatatgcatggagagacattcttctccccactgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catagtaggtagggctattagctggcatatgcatggagagacattcttctccccactgaa 499
Query: 300 ctcaggatgtggacaggctacgtacgcatgcactctctcactgagctatatccctagtcc 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctcaggatgtgaacaggctacgtacgcatgcactctctcactgagctatatccctagtcc 559
Query: 360 tttttctgacttgagataaggtctcacaagactgcctagtctggcactgaacttcctctg 419
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttttctgacttgagacaaggtctcacaagactgcctagtctggcactgaacttcctctg 619
Query: 420 tagccttaagcgagatctgaatttgcaatctgccctagcctccttcctgagtt 472
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 620 cagccttaagcgagatctgaatttgcaatctgccctagtctccttcctgagtt 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
