Query= MSMg01no362_f02.b1 MSMg01no362_f02.b1 CHROMAT_FILE:
MSMg01no362_f02.b1 PHD_FILE: MSMg01no362_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:38 2005
(392 letters)
>mm_chr11_5822923_5823715
Length = 793
Score = 574 bits (297), Expect = e-168
Identities = 364/397 (91%), Gaps = 21/397 (5%)
Strand = Plus / Plus
Query: 7 gaattctttccc-ttactataacaaaattaccttgtcatggatcaaagggcgggtagaat 65
||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 207 gaattctctcccaatactataacaaaattaccttgtcgtggatcaaagggcgggtagaat 266
Query: 66 caggtgtgtgtgtggcgatagcacaatgaaacccattactttgtatgccaaacaaaactt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caggtgtgtgtgtggcgatagcacaatgaaacccattactttgtatgccaaacaaaactt 326
Query: 126 aatttaaaggccaggcgtggtggcgcatgcctttaatcccagcactcgggaggcagagac 185
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 327 aatttaaaggccaggcgtgttggcacatgcctttaatcccagcactcgggaggcagagac 386
Query: 186 aggcggatttctgagttcgaggccagcctggtctacagagtgagttccaggacagccagg 245
|||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 387 aggcagatttctgagttcgaggccagcctggtctacaaagtgagctccaggacagccagg 446
Query: 246 gctatacagcaaaaccctgtcttgaaaaatatatatcaaacaaacaaaca----aacaaa 301
||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct: 447 gctatacagcaaaaccctgtcttgaaaaa-------caaacaaacaaacaccccaaaaaa 499
Query: 302 cacccaaaaaaccaaaccaaaccaaaccaaaacaaa------aaaacccttaatttaaaa 355
| ||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 500 aa---aaaaaaccaaaacaaaccaaaccaaaacaaacaaaaaaaaacccttaatttaaaa 556
Query: 356 agaaatggattgaaatggtgaaattataacattctta 392
|||||||||||||||||||||||||| ||||||||||
Sbjct: 557 agaaatggattgaaatggtgaaattagaacattctta 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 793
Length adjustment: 9
Effective length of query: 383
Effective length of database: 784
Effective search space: 300272
Effective search space used: 300272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_f02.g1 MSMg01no362_f02.g1 CHROMAT_FILE:
MSMg01no362_f02.g1 PHD_FILE: MSMg01no362_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:38 2005
(143 letters)
>mm_chr11_6016123_6016665
Length = 543
Score = 248 bits (128), Expect = 1e-70
Identities = 134/136 (98%)
Strand = Plus / Minus
Query: 4 gccagccttaagcaggtctcaaaaggggatgtggggtggggtggggactgaagggcttgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gccagccttaagcaggtctcaaaaggggatgtggggtggggtggggactgaagggcttgg 280
Query: 64 gagatggtgtagtgggcgagaacacttgcttcctaagcatgatgaccacacttgtgctgt 123
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 279 gagatggtgtagtgggcgagaacacttgctttgtaagcatgatgaccacacttgtgctgt 220
Query: 124 aggggtgggtgggtgg 139
||||||||||||||||
Sbjct: 219 aggggtgggtgggtgg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 143
Length of database: 543
Length adjustment: 8
Effective length of query: 135
Effective length of database: 535
Effective search space: 72225
Effective search space used: 72225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
