TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATCTGTTTATCTTGAATGGATAAAAGCCTGCTGGTGGCAGAGGGACTC
ACAGACCCTACTAGGAAGACTGCTGCAGACAAAAAAAGAAGGGGTGGAGA
GGGGGGGGAGAAAGTGTTTCCTTTTCTGTTGTTTTCCTTGTCTTCTTTTC
CCCCTTTTTTCTTTTTTTACCTTCTTTTTTTACCTTTCTTTCCTTCTTCT
TTCTGCCCGTTCTTCTTCTTTTTCCTTCTTCTTTTTTCTTCCCTCCCTTC
TTTTTTTTTTCTTTTCCCTTTTTTTTTTTTCTCCTTTCTCTTTTCTTTCC
TCTCATTTTTTCTCTTCTCCTCCCCCTTTCCTTTTTTCCCCTCCTTTTTT
TTTTTTTTCTTTTTTTTTTTTCTTTCCTCCTTCTTTCTCCCTTTTTTTTT
TTTTCTCCTCTTATTTCTTTCTTTACTTTCTCTCTTCTCTTTCTCCCTTA
TTTATTTTTTCTCTCCTTTCTCTTTTCTTCTTCTCTTTTTTTTCTCTCTC
CTCTCCTCTCTTTCTCCTTCTTTTTTTCTCCCTCTTTTTTCTTTTTTTTT
TTTTTTTTCCTTCTTCTCTCTTCCCCTTTTTTTTTTTTCCCCTCCTCCTT
CTCCTTTTTTTCTCTTTCTTATTTTTCTCCCTCTTTTTTCTTTTTTTTCC
TTTTCTTTTTTCTTTTCTTCCCCCTTTTTTTCCTTCTCTTCCTTTTTTCT
TTTTTCTTTCCTTCCCTCCTCTTCTCTTTTTTTTTCTATTTCTTTCCATT
TTTTTCCTTTCCTCTCCCCTCCTCTTCCCTCTTTTCTTTTCCTTTTTCTT
TTTTTCCTTCTCTTTCCTTCTTCTCTTTTCTCCTTTCTTCTTTT

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATGGCATGTGTAATTACAAAACAACTGCT
GGTTTTTTTTGCACTTTTTCCAATTTGGATCCAATACAGAGTGAGTAAAG
TATCTCACACATTCACTTGTACAGGCAGCAATATGCTGGAAGGCCCCCTG
CAGAAGTGATGGCTCTCACAGCTTCCTGAAAGCCTCAGTTTGTCGAGTTA
CAGTTCTGTGTTTGGGGCTTAGTCATGGTAAAAGGAGCATTTAAATGTGA
CTAAATAAATAAATGAATAAATAAAACAACCAAACAAAAACCTACCAGGA
AGTCTATCATACAAACTAAACTCTCACAGAGTGACTAAGTAATTAGTTCT
GGGGTGTTGATGCCCACTTGTTGCTTTAGGAAATTGATTCCTAGTACTTA
ATGACATTTGACATCTCTGCCCCTCCCACCACCTTCCATCTCCTTTAACC
CCTTCTGCTAATCCACTGAAATCAAATAANAAAACTGGCCAGTCTTTATC
CAAAAAGGCAAGATTAATACCCAGTGTACTTTCTTACTGCTCCTGCAACA
CTAATCATTATGTGTACCAAGCAAATACCACTTATTGTCAGCAACACCCA
CTCTTTGGACAAGGGAAACAAAAAAAACCAGGTGTGTGAAAAAAATCCGT
GTTCTTCTACTAATAAAACTTTTTGTCCCGGTATGCTCCTTCACAATAAT
ATCCCTTGTTACCCATTTTTTACCTATAGGTTTA

Query= MSMg01no362_k08.g1 MSMg01no362_k08.g1 CHROMAT_FILE:
MSMg01no362_k08.g1 PHD_FILE: MSMg01no362_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:06 2005
         (479 letters)



>mm_chr11_42236086_42236962
          Length = 877

 Score =  899 bits (465), Expect = 0.0
 Identities = 475/479 (99%), Gaps = 3/479 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatgtgtaattacaaaacaactgctggttttttttgcactttttccaatttggatc 60
           |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||
Sbjct: 201 atggcatgtgtaattacaaaacaactgctgg--ttttttgcacttttcccaatttggatc 258

                                                                       
Query: 61  caatacagagtgagtaaagtatctcacacattcacttgtacaggcagcaatatgctggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caatacagagtgagtaaagtatctcacacattcacttgtacaggcagcaatatgctggaa 318

                                                                       
Query: 121 ggccccctgcagaagtgatggctctcacagcttcctgaaagcctcagtttgtcgagttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggccccctgcagaagtgatggctctcacagcttcctgaaagcctcagtttgtcgagttac 378

                                                                       
Query: 181 agttctgtgtttggggcttagtcatggtaaaaggagcatttaaatgtgactaaataaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agttctgtgtttggggcttagtcatggtaaaaggagcatttaaatgtgactaaataaata 438

                                                                       
Query: 241 aatgaataaataaaacaaccaaacaaaaacctaccaggaagtctatcatacaaactaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aatgaataaataaaacaaccaaacaaaaacctaccaggaagtctatcatacaaactaaac 498

                                                                       
Query: 301 tctcacagagtgactaagtaattagttctggggtgttgatgcccacttgttgctttagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tctcacagagtgactaagtaattagttctggggtgttgatgcccacttgttgctttagga 558

                                                                       
Query: 361 aattgattcctagtacttaatgacatttgacatctctgcccctcccaccaccttccatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aattgattcctagtacttaatgacatttgacatctctgcccctcccaccaccttccatct 618

                                                                      
Query: 421 cctttaaccccttctgctaatccactgaaatcaaataanaaaactggccagtctttatc 479
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 619 cctttaaccccttctgctaatccactgaaatcaaataa-aaaactggccagtctttatc 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 877
Length adjustment: 10
Effective length of query: 469
Effective length of database: 867
Effective search space:   406623
Effective search space used:   406623
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)