Query= MSMg01no363_a10.b1 MSMg01no363_a10.b1 CHROMAT_FILE:
MSMg01no363_a10.b1 PHD_FILE: MSMg01no363_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:36 2005
(394 letters)
>mm_chr11_113327521_113328314
Length = 794
Score = 603 bits (312), Expect = e-177
Identities = 333/340 (97%)
Strand = Plus / Minus
Query: 5 gaattccacaaggatctcagacagtaaagaatgggctcctcgttttcctgtgggggagaa 64
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaattccacaaggaactcaggcagtaaagaatgggctcctcgttttcctgtgggggagaa 306
Query: 65 gcactctgcggggagttgggttcttcatattataacccagcagagacacgtgtctgcatt 124
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcgctctgcggagagttgggttcttcatattataacccagcagagacacgtgtctgcatt 246
Query: 125 tcacctaggtctaaaactttgtgggtggctaaattcaaacgggggctggaaagatggctc 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 245 tcacctaggtctaaaactttgtgggtggctaaattcaaacgggggctggatagatggctc 186
Query: 185 agtgggtaagagtaaacgcattactcttgaagaggacctgagtttgagtctcagcaccca 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 185 agtgggtaagagtaaacgcattactcttgaagaggacctgagtttgattctcagcaccca 126
Query: 245 ctcacaaatacctgtatttccagctccctgggtatctgatgcctctggcctctgtggacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctcacaaatacctgtatttccagctccctgggtatctgatgcctctggcctctgtggacg 66
Query: 305 caaaaatgttcaaacatacacacaaacacacacacacaca 344
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 caaaaatgttcaaacacacacacaaacacacacacacaca 26
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_a10.g1 MSMg01no363_a10.g1 CHROMAT_FILE:
MSMg01no363_a10.g1 PHD_FILE: MSMg01no363_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:36 2005
(427 letters)
>mm_chr11_113167988_113168814
Length = 827
Score = 721 bits (373), Expect = 0.0
Identities = 415/429 (96%), Gaps = 4/429 (0%)
Strand = Plus / Plus
Query: 1 ccagtacttgtctgggtcaagaccaagggcttttggagctacactggaacactgtattta 60
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 201 ccagtacttgtctgggtcaagaccaagggcttttggggctacactggaacattgtattta 260
Query: 61 tttgaatgaggaagacactgtgtacggag-agagaggcgctggcgtttcttcaggatcca 119
||||||||||||||||||||||||| ||| | ||||| ||||| ||||||||||||||||
Sbjct: 261 tttgaatgaggaagacactgtgtactgagca-agaggtgctggtgtttcttcaggatcca 319
Query: 120 ctgttcccgtgaatgacttctttctttctttgcactctgttcggttgggtcgggg-gagg 178
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 320 ctgttcctgtgaatgacttctttctttctttgcactctgttcggttgggtcggggcgggg 379
Query: 179 gggttgtcaaagacacggggacagagttcacttgagacccagtatggttcagcaagatgc 238
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggt-gtcaaagacacggagacagagttcacttgagacccagtatggttcagcaagatgc 438
Query: 239 tatccttggggtttggcacctaacaaccctgctaagacatcaatggctccttggggcctc 298
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatccttggggtttggcgcctaacaaccctgctaagacatcaatggctccttggggcctc 498
Query: 299 acctctccctttgtacccactctcctgtgtgagtctcttatgtggtccctgtgtcgttgc 358
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 499 acctctccctttgtacccactctcctgtgtgagtctcttacgtggtccctgtgtcgttgc 558
Query: 359 aagccacctggttgagaatttggaattctgctttctcacctaatatcttaaccctagagt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aagccacctggttgagaatttggaattctgctttctcacctaatatcttaaccctagagt 618
Query: 419 acagagttc 427
|||||||||
Sbjct: 619 acagagttc 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
