Query= MSMg01no363_h11.b1 MSMg01no363_h11.b1 CHROMAT_FILE:
MSMg01no363_h11.b1 PHD_FILE: MSMg01no363_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:11 2005
(571 letters)
>mm_chr11_25146941_25147909
Length = 969
Score = 1058 bits (547), Expect = 0.0
Identities = 562/567 (99%), Gaps = 2/567 (0%)
Strand = Plus / Plus
Query: 5 gaattccaggtctttcacggctacgtgctaagactatcaatatacaacagacgaagaaaa 64
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggtcagtcagggctacgtgctaagactatcaatatacaacagacgaagaaaa 264
Query: 65 caaaataaaatctgccatatagttaaattgtctagacaatgaacagaaacaagacaaagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaaataaaatctgccatatagttaaattgtctagacaatgaacagaaacaagacaaagt 324
Query: 125 cacacacaaaacccatactgattcttgtgtttaccatcaatatacatatagttcaagcta 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 cacacacaaaacccatactgattct-gtgtttaccatcaatatacatatagttcaagcta 383
Query: 185 tacataatatcaaagtgcattctcctccattacaacagtgcaaagaagcacggattatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacataatatcaaagtgcattctcctccattacaacagtgcaaagaagcacggattatat 443
Query: 245 attaggtgcttgataaacatatagtaaatcagttcttatgtagaccagttacagtgatgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attaggtgcttgataaacatatagtaaatcagttcttatgtagaccagttacagtgatgg 503
Query: 305 aaaacaacatagccacaattctaaagtgacagtgtttgacgagccagtggtcgtttgctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaacaacatagccacaattctaaagtgacagtgtttgacgagccagtggtcgtttgctt 563
Query: 365 gagttgtgaacacaagcaatagatttagagtattatgaaaatatatgctgtgttaagtgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagttgtgaacacaagcaatagatttagagtattatgaaaatatatgctgtgttaagtgc 623
Query: 425 tgtgaattatgctgaataattctgaacataactttcactgaactaatgaatcaaggtgga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgaattatgctgaataattctgaacataactttcactgaactaatgaatcaaggtgga 683
Query: 485 gcttcccacattctctagaatcagtgtgtgaaaaaaaaatgtgtttagaaactctgatgt 544
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 684 gcttcccacattctctagaatcagtgtgtgaaaaaaaa-tgtgtttagaaactctgatgt 742
Query: 545 aagctgcattcagcatcattggcaaga 571
|||||||||||||||||||||||||||
Sbjct: 743 aagctgcattcagcatcattggcaaga 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 969
Length adjustment: 10
Effective length of query: 561
Effective length of database: 959
Effective search space: 537999
Effective search space used: 537999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_h11.g1 MSMg01no363_h11.g1 CHROMAT_FILE:
MSMg01no363_h11.g1 PHD_FILE: MSMg01no363_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:11 2005
(194 letters)
>mm_chr11_25323082_25323675
Length = 594
Score = 362 bits (187), Expect = e-104
Identities = 190/191 (99%)
Strand = Plus / Minus
Query: 1 gtctatggtatattgccagtaaaatgccttggccaagcttcagttctgcctgatgtcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gtctatggtatattgccagtaaaatgccttggccaagcttcagttctgcctgatgtcaca 332
Query: 61 tctatatgagccctgtgatagcattaaactggccgcagctgtttctgattgaagcactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tctatatgagccctgtgatagcattaaactggccgcagctgtttctgattgaagcactgt 272
Query: 121 agacctctgcaagcagggctcacctcttctccaaccattcccaccctcctctggagtgac 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 agacctctgcaagcagggctcacctcttctccaaccattcccaccctcttctggagtgac 212
Query: 181 attaacaaaga 191
|||||||||||
Sbjct: 211 attaacaaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
