Query= MSMg01no365_c13.b1 MSMg01no365_c13.b1 CHROMAT_FILE:
MSMg01no365_c13.b1 PHD_FILE: MSMg01no365_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:35 2005
(516 letters)
>mm_chr11_111615442_111616357
Length = 916
Score = 576 bits (298), Expect = e-168
Identities = 307/310 (99%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 1 atgaacgctgaacaagggaagaaaacaaataaataagcttgacttcagaaacgggaagtc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atgaatgctgaacaagggaagaaaacaaataaataagcttgacttcagaaacgggaagtc 250
Query: 61 aaaaaataaaaaataaatgggaagtcaatgaccaaattgaaaaaaaaaaagaggatccat 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 249 aaaaaataaaaaataaatgggaagtcaatgaccaaattg-aaaaaaaaaagaggatccat 191
Query: 121 cccatatataatcactaaacccagacattattgtggatgccaagtgcttgcagacaggag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 190 cccatatataatcactaaacccagacattattgtggatgccaagtacttgcagacaggag 131
Query: 181 cctgatatagctgtctcttgagaggctatgccagtgcctgacaaatgcagaagtggatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cctgatatagctgtctcttgagaggctatgccagtgcctgacaaatgcagaagtggatgc 71
Query: 241 tcacagccatccattggactgagtacaaggtccccaatgaaggagctagagaaaggaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tcacagccatccattggactgagtacaaggtccccaatgaaggagctagagaaaggaacc 11
Query: 301 aaggagttga 310
||||||||||
Sbjct: 10 aaggagttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_c13.g1 MSMg01no365_c13.g1 CHROMAT_FILE:
MSMg01no365_c13.g1 PHD_FILE: MSMg01no365_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:35 2005
(487 letters)
>mm_chr11_111490354_111491240
Length = 887
Score = 864 bits (447), Expect = 0.0
Identities = 477/487 (97%)
Strand = Plus / Plus
Query: 1 cagggttccattcatctaaacattttccccagcattgagactacacatgcacactgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggttccattcatctaaacattttccccagcattgagactacacatgcacactgctgc 260
Query: 61 tcttgaggctgctttcttggtggttggttgtttatgtggctctggcaatcaaacccaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgaggctgctttcttggtggttggttgtttatgtggctctggcaatcaaacccaggt 320
Query: 121 ccccacaccaactttaaggaccttgctggctgtgcattctttcagcactgcatgtagata 180
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ccccacaccaactttaaggatcttgctggctgtgcattctttcagaactgcatgtagata 380
Query: 181 tccttaaagtgcattgaaaagtatttctcaaatatcaattatgggaaatggacagattgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccttaaagtgcattgaaaagtatttctcaaatatcaattatgggaaatggacagattgc 440
Query: 241 tcagtatttaagagttgcgtgccactcttggagagaatctgagtttggttcctagaacct 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtatttaagagttgtgtgccactcttggagagaatctgagtttggttcctagaacct 500
Query: 301 gcgatggagaactcacaactacctataaatcctgctctaagggatctgataccttcaggt 360
|| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 501 gcaatggagaactcacaactacctataaatcctgctccaggggatctgataccttcaggt 560
Query: 361 ttctctacaaccactatattcatgtgtgcccacatacacatactcacacatgcactccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctctacaaccactatattcatgtgtgcccacatacacatactcacacatgcactccta 620
Query: 421 atagaaaatataaataaaagtttaaataataccaaattgtgtctttgttgtcgttgttgt 480
|||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 621 atagaaaacataaataaaagtttaaataataccaaattttgtctttgttgtcattgttgt 680
Query: 481 ttgttgt 487
|||||||
Sbjct: 681 ttgttgt 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
