XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AAAGATGCAAGAACCTTGATCATTGAAGACATGAAGAAGAAATGGGTGCC
TTAGTCAAAACAAACAAAAGAAGGCAAACAACAAATCCTATCACAACACA
TCCAGCAAATCTGGGGCAATCTGAAAAGATCCAATCTAAGAATAATAGGA
ATAAAGGAAAGAAAGAAATCCCATGTCCAAAGCACAAAACTTAAAGGACC
TTTGCACCTGCAAAGGTGCAAGAAGCTTACAGAGCACTGAACAGACCGGA
GCAGAAAGAAAATCCACTCAGTACATAATAATCAAAACACTAAACACACA
GAACAAAGAAAGACTACTAAAAGCTGCAAGGGAAAAAAGACCAAGTAACA
TATAAAGATAGATCTATGAGAATAATACCTGACTTCGCAGTGACAATACG
AAAAACCAGAAGGCCTTGACAAGTGTACTACATATTTTAAGCGACCACAG
ATGCCAGCTAAGACTAATATACAAAGCATAACTTTCAATTACAAGGATGG
GAAAAGTAAGATATTATAGGACAAATCAAATTTAGGCAATATATATCTAC
AAATCTAACCCTATTTAAAGTGGCTAAGAGGAAAACTTAACCTTAAGGAA
GCTAACTTTACCCCGCGGAACCCAGAATAATTAAGCCCCTTCCCCCAAAG
GAAAGATGGGAAAACCTTGGGTTTTACACCACGGCAGCCATTCCACTTGG
TCTTGGAATCCCTCTACCCCACAGGGTCCAAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXATTGCTCTTCAGGTCTTTAGGTTTCAAAAATTATTCCTGAAAT
GTTCTCAGTGGCCATTTCTTGGGGGTATTGTACTCTTTAGTAAATTGGCG
ACGGAATCCAGGCATTTATGGCAATAGCTCTTGTTTTCTTATTGCTTAAG
TAGCAAGTGTATACCTGTGAATAGATTGAGACTGGCTTAAGACAGGCTAA
GAAAATTGAGGGGGCAATAGTAGAAAAAAGTTAGACAAAATGGATATTGT
TCATTTGATGGTGGGATTGAATGTTTAATGGCACCTATATAGGTATGAAC
GACTTTTGTTTTAATAACAAAGTTGTTGATTTTCTACTAAGGGTTCTTTT
AGGTTGTCATCAGGGGCTGATGGGAATAACAGTTCACTCAACTCTCCAGC
TAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACCTGTGGTAC
ATTCTCTTAAGGTAAACATTTTTCCGGAACCTCGGTCGTGGCGTGGTCTG
TTTGCTGGAATCCGAAGTTCTCACCCTTGCTATAACCTACCTACTTTATT
TTTAACCCCTTTTTTGGGGAAAAATTTTTATCCCCGGATTTAAGTTGGGG
GACTAACCCGGGGGTGGGGGGTTAAGGCCCCAAACTATTTTTTTGTACCT
TTGTTGGACACTGGGGTCTCCTTTCTTCCTTGGCTTATATAAAGGGGGCG
GGCTCTTATGGCCCG

Query= MSMg01no365_n14.g1 MSMg01no365_n14.g1 CHROMAT_FILE:
MSMg01no365_n14.g1 PHD_FILE: MSMg01no365_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:27 2005
         (432 letters)



>mm_chr11_28295868_28296699
          Length = 832

 Score =  828 bits (428), Expect = 0.0
 Identities = 431/432 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgctcttcaggtctttaggtttcaaaaattattcctgaaatgttctcagtggccattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 attgctcttcaggtctttaggtttcaaaaattattcctgaaatgttctcagtggccattt 573

                                                                       
Query: 61  cttgggggtattgtactctttagtaaattggcgacggaatccaggcatttatggcaatag 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cttgggggcattgtactctttagtaaattggcgacggaatccaggcatttatggcaatag 513

                                                                       
Query: 121 ctcttgttttcttattgcttaagtagcaagtgtatacctgtgaatagattgagactggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctcttgttttcttattgcttaagtagcaagtgtatacctgtgaatagattgagactggct 453

                                                                       
Query: 181 taagacaggctaagaaaattgagggggcaatagtagaaaaaagttagacaaaatggatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taagacaggctaagaaaattgagggggcaatagtagaaaaaagttagacaaaatggatat 393

                                                                       
Query: 241 tgttcatttgatggtgggattgaatgtttaatggcacctatataggtatgaacgactttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgttcatttgatggtgggattgaatgtttaatggcacctatataggtatgaacgactttt 333

                                                                       
Query: 301 gttttaataacaaagttgttgattttctactaagggttcttttaggttgtcatcaggggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gttttaataacaaagttgttgattttctactaagggttcttttaggttgtcatcaggggc 273

                                                                       
Query: 361 tgatgggaataacagttcactcaactctccagctagcttcagtggacataccacaccttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgatgggaataacagttcactcaactctccagctagcttcagtggacataccacaccttc 213

                       
Query: 421 tcagcagcctga 432
           ||||||||||||
Sbjct: 212 tcagcagcctga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)