Query= MSMg01no366_h07.b1 MSMg01no366_h07.b1 CHROMAT_FILE:
MSMg01no366_h07.b1 PHD_FILE: MSMg01no366_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:18 2005
(467 letters)
>mm_chr11_79946018_79946884
Length = 867
Score = 857 bits (443), Expect = 0.0
Identities = 461/471 (97%), Gaps = 8/471 (1%)
Strand = Plus / Minus
Query: 1 aaatggtagaagaacactcagtaaagctcagtgcttctgcagttgctttcaattctccag 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 667 aaatggtagaagaacactcagtaaagctcagtgcttctgcagttgcttttaattctccag 608
Query: 61 cgctctgaggagcccacctgtctctattctcaagactaaactcatcacaaagtccacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cgctctgaggagcccacctgtctctattctcaagactaaactcatcacaaagtccacttt 548
Query: 121 taacccttccatttgtccagtgaaaggcacttctacccaattcattctgttcccctggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 taacccttccatttgtccagtgaaaggcacttctacccaattcattctgttcccctggat 488
Query: 181 ctgttaaaagagcatctatgaaggacatgttctccatgaactcactgagagaatttaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctgttaaaagagcatctatgaaggacatgttctccatgaactcactgagagaatttaaac 428
Query: 241 agtggga----ttttagcatgcaacacttcttctctgctagtgtcttagggggctgaggt 296
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agtgggaaacg----agcatgcaacacttcttctctgctagtgtcttagggggctgaggt 372
Query: 297 acagagtggggcttgaaaccactgttctgtgtcttaatctctggattgctgtctctgctt 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 371 acagagtggggcttgaaaccactgttctgtgtcttaatctctggattgctgtctcttctt 312
Query: 357 atgttgtcttctacagacaaggagggtgcaggagataggctaggcagttcaccagaaaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atgttgtcttctacagacaaggagggtgcaggagataggctaggcagttcaccagaaaag 252
Query: 417 tctaggccagtgtcaaacaggtcactgtcatctaggatcaccatctttttc 467
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tctaggccagtgtcaaacaggtcactgtcatctaggatcaccatctttttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_h07.g1 MSMg01no366_h07.g1 CHROMAT_FILE:
MSMg01no366_h07.g1 PHD_FILE: MSMg01no366_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:18 2005
(439 letters)
>mm_chr11_79759260_79760098
Length = 839
Score = 816 bits (422), Expect = 0.0
Identities = 431/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Plus
Query: 1 agaattctggggtgtgactcaggatgagatgagctaagcccctgcacctggcacagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaattctggggtgtgactcaggatgagatgagctaagcccctgcacctggcacagtcca 260
Query: 61 agcagcacaaagccctcctgccctatatccagattaagggcaaaccaggctagatcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagcacaaagccctcctgccctatatccagattaagggcaaaccaggctagatcttca 320
Query: 121 cgatgacaggtcacccacagcaaaaagcaagcgattaagtgtgaaatgctggaagctgcc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgatgacgggtcacccacagcaaaaagcaagcgattaagtgtgaaatgctggaagctgcc 380
Query: 181 cagtgttgttctgcagagaacagacgctttctaaccactcactgtagctatgcaacgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgttgttctgcagagaacagacgctttctaaccactcactgtagctatgcaacgtaa 440
Query: 241 atccttatctgccctctgaggggcacactactggtcttcttagaaaacctctccaagcaa 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atccttacctgccctctgaggggcacactactggtcttcttagaaaacctctccaagcaa 500
Query: 301 aaggtgatgtaacacttccacatggcctctggaaaaggcagatgacaccaattagatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtgatgtaacacttccacatggcctctggaaaaggcagatgacaccaattagatcac 560
Query: 361 cagtcctcttagttcaaaaacctttctttctttttctttctttctttctttctttttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 cagtcctcttagttcaaaaacctttctttctttttctttctttctttcttt-tttttttt 619
Query: 421 tttttttttttttt 434
||||||||||||||
Sbjct: 620 tttttttttttttt 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
