Query= MSMg01no366_l23.b1 MSMg01no366_l23.b1 CHROMAT_FILE:
MSMg01no366_l23.b1 PHD_FILE: MSMg01no366_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:41 2005
(445 letters)
>mm_chr11_29621042_29621886
Length = 845
Score = 781 bits (404), Expect = 0.0
Identities = 434/444 (97%), Gaps = 4/444 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttgattctt-gcttggtaagaggcctcaccaggggaaggagctcctttccctt 62
|||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 ggaattcttgattcttag-ttggtaagaggcctcaccaggggaaggggctcctttccctt 262
Query: 63 cccacccccacagtctttccttcctttccaatcacacctgctttataagcactgagaaga 122
|||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 263 cccaaccccatagtctttccttcctttccaatcacacctgctttagaagcactgagaaga 322
Query: 123 cactgttaatacagtgactagaatttcctgggtagagtagact-tcataggataaagttg 181
||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 323 cactgttaatacagtgactagaatttcctgggtagagtagactgt-ataggataatgttg 381
Query: 182 acagatagatttgtaggctcaaagatgatagaaggttagacggtctaggtcaggtttcct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acagatagatttgtaggctcaaagatgatagaaggttagacggtctaggtcaggtttcct 441
Query: 242 gaagcttctccgtggttcacaagaaagagtcctgtgatcctatcaaaacaagctctacag 301
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaagcttctctgtggttcacaagaaagagtcctgtgatcctatcaaaacaagctctacag 501
Query: 302 ggcctggcaatctggtgtcatcattttataattgggcagatttggaaaacaatctagggt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggcctggcaatctggtgtcatcattttataattgggcagatttggaaaacaatctagggt 561
Query: 362 tcacaccttagttctagtatgttttgattttgactaggtatgaaactgcctcttaagttt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcacaccttagttctagtatgttttgattttgactaggtatgaaactgcctcttaagttt 621
Query: 422 ttattctgttgtgtgatttatagg 445
||||||||||||||||||||||||
Sbjct: 622 ttattctgttgtgtgatttatagg 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_l23.g1 MSMg01no366_l23.g1 CHROMAT_FILE:
MSMg01no366_l23.g1 PHD_FILE: MSMg01no366_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:41 2005
(433 letters)
>mm_chr11_29806918_29807750
Length = 833
Score = 830 bits (429), Expect = 0.0
Identities = 432/433 (99%)
Strand = Plus / Minus
Query: 1 atgaaattcttaggcaaatggatggaagtataaaatatcatccagagtgaggtagcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 atgaaattcttaggcaaatggatggaagtataaaatatcatccagagtgaggtagcccaa 707
Query: 61 tcacaaaataatacacatggtatgcactcactgataaatggatattagcccagaagttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tcacaaaataatacacatggtatgcactcactgataaatggatattagcccagaagttca 647
Query: 121 ttcggaatacccagcccttgttctaagaagcacatgttgtgtgcaagctggggaaggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttcggaatacccagcccttgttctaagaagcacatgttgtgtgcaagctggggaaggagg 587
Query: 181 cctgagacctagggcttagaaaaggagaaatagcttactttttgttgtacttaagtggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 cctgagacctagggcttagaaaaggagaaatagcttactttttgttgtacttaagtggta 527
Query: 241 aaggaggaacctggagaaatgagaatcatgggctgggaagaggtagtttcaagaaaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaggaggaacctggagaaatgagaatcatgggctgggaagaggtagtttcaagaaaagca 467
Query: 301 taaaataactttgattttaaaaacctaattgcaatgggagattttaaatccatctaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 taaaataactttgattttaaaaacctaattgcaatgggagattttaaatccatctaataa 407
Query: 361 atgtgtgggcacaagagaacatctgagatagttaaccctacagtaaaggccccatatatt 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgtgtgggcataagagaacatctgagatagttaaccctacagtaaaggccccatatatt 347
Query: 421 caaacaggagtgt 433
|||||||||||||
Sbjct: 346 caaacaggagtgt 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
