Query= MSMg01no368_b07.b1 MSMg01no368_b07.b1 CHROMAT_FILE:
MSMg01no368_b07.b1 PHD_FILE: MSMg01no368_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:25 2005
(538 letters)
>mm_chr11_8491634_8492571
Length = 938
Score = 1011 bits (523), Expect = 0.0
Identities = 532/535 (99%)
Strand = Plus / Minus
Query: 4 ggaattcctctgtgtcgctatctggaacagtctcaaaaagtttagaacctttattaaaaa 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ggaattcctctgtgttgctatctggaacagtctcaaaaagtttagaacctttattaaaaa 679
Query: 64 aaataaaaaccctaggtctgatttctaattctagctcgtgttagagaggtcttctgtgaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaataaaaaccctaggtctgatttctaattctagctcgtgttagagaggtcttctgtgaa 619
Query: 124 attaagcttccctttgggcttgtgaaaaggacttcagccccctgttagcccaggactgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attaagcttccctttgggcttgtgaaaaggacttcagccccctgttagcccaggactgtg 559
Query: 184 gcttctgcgggaacttgctcttgttcctcaagatgtgctatgtatagacacctgaagaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcttctgcgggaacttgctcttgttcctcaagatgtgctatgtatagacacctgaagaga 499
Query: 244 ggggagttttctgaggcatggtgagcaggccccttcatggagtgctagagaacattagca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggggagttttctgaggcatggtgagcaggccccttcatggagtgctagagaacattagca 439
Query: 304 tcagccagcctgcatcgaggccagagagggcactgtgtgtgcttcctcagttctccttga 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 438 tcagccagcctgcatcgaggccagagagggcactgtgtgtgcttcctcagttcttcttga 379
Query: 364 gaatactgtctgctcctctcatttagaggactctacctgggtgtttctggagactggagt 423
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 378 gaatactgtctgctcctctcatttagaggactctacctgggtatttctggagactggagt 319
Query: 424 cagaggtcctggtcagtgcacttgggctgtggcatcttagggcttctgccaggctgcctg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cagaggtcctggtcagtgcacttgggctgtggcatcttagggcttctgccaggctgcctg 259
Query: 484 tggtactgcccatctggcctgctgctctttcccctgatcttcaggatcccccttg 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tggtactgcccatctggcctgctgctctttcccctgatcttcaggatcccccttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_b07.g1 MSMg01no368_b07.g1 CHROMAT_FILE:
MSMg01no368_b07.g1 PHD_FILE: MSMg01no368_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:25 2005
(570 letters)
>mm_chr11_8338879_8339848
Length = 970
Score = 1079 bits (558), Expect = 0.0
Identities = 567/570 (99%)
Strand = Plus / Plus
Query: 1 agggagaatggagtagaaagacaatccttcaagcttgccttgtagcacggacaagctaga 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 agggagaatggagtagaaagacaacccttcaagcttgccttgtagcacggacaagctaga 260
Query: 61 gtcaggctaagtggacggatgaccatggagagctgagttacgcaatggagtcctacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaggctaagtggacggatgaccatggagagctgagttacgcaatggagtcctacagaa 320
Query: 121 ccacagagaactgagacttgcactgtatttctaaaaaccacgagcaaactcattctacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacagagaactgagacttgcactgtatttctaaaaaccacgagcaaactcattctacaa 380
Query: 181 accgcaggaaggaatgtgaaagaactgtgcgaaggacaatcccaggagaggagggggcag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 accgcaggaaggaatgtgaaagaactgtgcgaaggacaatcccaggagaggagggggcgg 440
Query: 241 gaacaggcctggctgatgctcagagtggtctctggtttagaaacttccagcccacctccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacaggcctggctgatgctcagagtggtctctggtttagaaacttccagcccacctccc 500
Query: 301 cttcttcccagtgagacgtggctgcaccgggttcaggactcacttacccacctctttact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcttcccagtgagacgtggctgcaccgggttcaggactcacttacccacctctttact 560
Query: 361 tcagcattcccctgctttttattaaacaaaacaaaaccaacaaaaacccacatgatgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagcattcccctgctttttattaaacaaaacaaaaccaacaaaaacccacatgatgttt 620
Query: 421 attaaattctactcctacagcactaagctaaacagctagactatgtacagacctagggaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 attaaattctactcctacagcactaagctaaacagctagactatgtacagacctagggga 680
Query: 481 ggctggtgaaagagcctcttcttttaaggattcgatcacattcctcctccatttcaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggctggtgaaagagcctcttcttttaaggattcgatcacattcctcctccatttcaagaa 740
Query: 541 gaaacaattaagaattgaggcttaaaatac 570
||||||||||||||||||||||||||||||
Sbjct: 741 gaaacaattaagaattgaggcttaaaatac 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
