Query= MSMg01no368_g15.b1 MSMg01no368_g15.b1 CHROMAT_FILE:
MSMg01no368_g15.b1 PHD_FILE: MSMg01no368_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:51 2005
(640 letters)
>mm_chr11_40887771_40888811
Length = 1041
Score = 1083 bits (560), Expect = 0.0
Identities = 584/592 (98%), Gaps = 1/592 (0%)
Strand = Plus / Minus
Query: 5 gaattcacga-tttttcatgccaaaatgatttaagaaacataaacaataaagaaaagaaa 63
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gaattcacgatttttttatgccaaaatgatttaagaaacataaacaataaagaaaagaaa 640
Query: 64 tgggatattttaaaaggggtgagccagggctgtttgcaccttttcagcaaaaaagcaatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tgggatattttaaaaggggtgagccagggctgtttgcaccttttcagcaaaaaagcaatc 580
Query: 124 ctctaagcaaatatttactgtttggatccttgagcgtgagatgtgaagacaggaatgtaa 183
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 579 ctctaagcaaatatttactgtttggatccttgagcatgagatgtgtagacaggaatgtaa 520
Query: 184 tgtccgtgcagtctgtttccagtgcattagtcattatattaaaaacagcagactagattc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgtccgtgcagtctgtttccagtgcattagtcattatattaaaaacagcagactagattc 460
Query: 244 tcttttcttgagaatgcatgctacacgctcaaaatcaatcttgatcaacaaactgcaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcttttcttgagaatgcatgctacacgctcaaaatcaatcttgatcaacaaactgcaaca 400
Query: 304 caatttgatgattcagagctgagaagattatggacatgtttcaattaaaaaacacattca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 caatttgatgattcagagctgagaagattatggacatgtttcaattaaaaaacacattca 340
Query: 364 gagaagataacttcaattcattatgcatctaacaatgcaaaaaaataaaaggaacaagct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gagaagataacttcaattcattatgcatctaacaatgcaaaaaaataaaaggaacaagct 280
Query: 424 ggaggctgccaagtcaattctacatggggaactctggtctacttcacctaacagcacagt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggaggctgccaagtcaattctacatggggaactctggtctacttcacctaacagcacagt 220
Query: 484 gcagatgaatttgtttttctttctttctttctttctttctttctttctttctttctttct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gcagatgaatttgtttttctttctttctttctttctttctttctttctttctttctttct 160
Query: 544 ttctttctttctttctttcttccttccttccttccttccttccttccttcct 595
||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 159 ttcttccttccttccttccttccttccttccttccttccttccttccttcct 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 89
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_g15.g1 MSMg01no368_g15.g1 CHROMAT_FILE:
MSMg01no368_g15.g1 PHD_FILE: MSMg01no368_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:51 2005
(478 letters)
>mm_chr11_40743184_40744061
Length = 878
Score = 909 bits (470), Expect = 0.0
Identities = 476/478 (99%)
Strand = Plus / Plus
Query: 1 tgcttgaatccagagtttgggatgacacacaatgactttttaattttcttttcaagacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcttgaatccagagtttgggatgacacacaatgactttttaattttcttttcaagacag 260
Query: 61 ggcctcactatgtcgccttggcaggcctggatctccctatatagaccaggttggcatcaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcctcactatgttgccttggcaggcctggatctccctatatagaccaggttggcatcaa 320
Query: 121 actcataaaactttttctgcctctgcctcctgaatgcttggaatgaaaggagtgtgctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcataaaactttttctgcctctgcctcctgaatgcttggaatgaaaggagtgtgctac 380
Query: 181 catactcggtgttaattctttaataagtatgtttatatttttctgcttcacattatttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catactcggtgttaattctttaataagtatgtttatatttttctgcttcacattatttta 440
Query: 241 tttatacatgattattttctaggaatttacttatttaatctcagctattgtattagctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatacatgattattttctaggaatttacttatttaatctcagctattgtattagctac 500
Query: 301 ctcaaacttattagtattagtaatatcacttttaaaatgtattgttgacattcattttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcaaacttattagtattagtaatatcacttttaaaatgtattgttgacattcattttta 560
Query: 361 cacagatgtgaaaaatttctaatgaaacacacatatatttgaacaatattttaaaactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagatgtgaaaaatttctaatgaaacacacatatatttgaacaatattttaaaactta 620
Query: 421 ttttttgttgaaataaagggtttttaaatatatatattttagtgtagtttttcttttg 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 ttttttgttgaaataaagggtttttaaatatatatatattagtgtagtttttcttttg 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
