XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGT
ATCTTCTGGATTGTTTTCATTCTTTATTTCAAAACCTGATATTGAAAATC
ACCTATTTCACATACTCAAAACTGTTCAATGTGCTCTCAGAATCCTACTG
TGGCTAATAGAAAATTGATTATTTCTATTAAATCAAGTTAGCAATGTATG
CCTAGAATTATTTGCTACAGGATGACTTGAGCCTTCTGCCTTTTCCTATG
TTGAAGCTGTCATTGGAGCTTCCATTAGATGACTCTATCGCACGAGTGGT
GTCACTTCTTATTCACAGACTGAAACACAAGCTAAAAAAGGAAATCAGCA
GGTTGAAATCCCATGGGATGAGTGATTTGGTAACCATCATCAATAAATTA
CAATCTGAACATGTATTAATATTTTTCTATCAAAGTAAATATAAATACAA
GTCATTCAAATTCTTTATCATTGAAGAGTACATCTCTAACCCTGGAACCT
CCAATAAAAAGAGAAGGTTCTTTCCCAGGTCTTCGTAGCTTGGCATGGTG
TCAACATGAACCAATTCCACGAACTGCATGCTCCTGATTAGAAAACTTTG
TTATTTTCCTTCCAAGGAGCAGAGGAGTGAATAAAACTGTGCTGAAGAAA
ACTAGCTGAGCTGGTTTTGCTAACACTGGGCCAAATATTGCAAATTTTCC
TTTACATATTCACCTTAAAATGTCTCCAGGATTTTTATTTTCCACCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTGTTTAGATTTGTACCTCAGTTTT
TATTTGTGTTATTTGGGTTGTTGGTGTCTAACTTTGAATTCTTGTAAATT
TTGGATATTAGCCTTCTGTCAGACATAGGGTTGGTGAAGATTCTTTCCCA
ATCTCTGGGCTAAATCTTGACAAAATAATCTTGAACCAAAACACCCATGA
CAAAGGCCACAGAGAACCAGAAAATTAATAATACACACACACACACACAC
ACACACACACACACACACTTTTTCACACACACATGAAAATTTAATACCTC
TCTGCACATGAGGAGATGTGAACAGACTGCTGGAAAAGGAAAACACCTGT
GTCTACAAACAGTGATTCACTATTTAGGGCTTCAGTACTGTGGAGAGATT
GGGAGTAATAGGTCCAGAGGCATATGTTGTCTTGGGCTAAGTTTAGTTCC
CAGGCAGACATTACTTTCCCACCTCTCTGTTAGAACTAGTTGTGTGATTC
AAAGATAAACTCATTTGGAATCTATTATCTATGTAGACCACTAGCTTCCA
CCAACTCATATGCTGTGAATAATGCCATCAAATAGCACATTGAGCCTTAT
AAAAAATAAAAGCTTTCCTTTATTCTGCTATCTTGATGAAACCCTCCTAT
CGCATTATGAACTTTTCCTTTTTTTTAAAACCTTGCGTCTGTTACCATAT
TAATACTTTCTT

Query= MSMg01no369_b14.b1 MSMg01no369_b14.b1 CHROMAT_FILE:
MSMg01no369_b14.b1 PHD_FILE: MSMg01no369_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:44 2005
         (496 letters)



>mm_chr11_14178386_14179281
          Length = 896

 Score =  930 bits (481), Expect = 0.0
 Identities = 490/493 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccagtatcttctggattgttttcattctttatttcaaaacctgatattgaaaat 63
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagtatcatgtggattgttttcattctttatttcaaaacctgatattgaaaat 263

                                                                       
Query: 64  cacctatttcacatactcaaaactgttcaatgtgctctcagaatcctactgtggctaata 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacctatttcacatactcaaaactgttcaatgtgctctcagaatcctactgtggctaata 323

                                                                       
Query: 124 gaaaattgattatttctattaaatcaagttagcaatgtatgcctagaattatttgctaca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaaattgattatttctattaaatcaagttagcaatgtatgcctagaattatttgctaca 383

                                                                       
Query: 184 ggatgacttgagccttctgccttttcctatgttgaagctgtcattggagcttccattaga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggatgacttgagccttctgccttttcctatgttgaagctgtcattggagcttccattaga 443

                                                                       
Query: 244 tgactctatcgcacgagtggtgtcacttcttattcacagactgaaacacaagctaaaaaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgactctatcgcacgagtggtgtcacttcttattcacagactgaaacacaagctaaaaaa 503

                                                                       
Query: 304 ggaaatcagcaggttgaaatcccatgggatgagtgatttggtaaccatcatcaataaatt 363
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 ggaaatcagcaggttgaaatcccatgggacgagtgatttggtaaccatcatcaataaatt 563

                                                                       
Query: 364 acaatctgaacatgtattaatatttttctatcaaagtaaatataaatacaagtcattcaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acaatctgaacatgtattaatatttttctatcaaagtaaatataaatacaagtcattcaa 623

                                                                       
Query: 424 attctttatcattgaagagtacatctctaaccctggaacctccaataaaaagagaaggtt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attctttatcattgaagagtacatctctaaccctggaacctccaataaaaagagaaggtt 683

                        
Query: 484 ctttcccaggtct 496
           |||||||||||||
Sbjct: 684 ctttcccaggtct 696


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)