Query= MSMg01no370_k17.b1 MSMg01no370_k17.b1 CHROMAT_FILE:
MSMg01no370_k17.b1 PHD_FILE: MSMg01no370_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:48 2005
(484 letters)
>mm_chr11_91414437_91415320
Length = 884
Score = 808 bits (418), Expect = 0.0
Identities = 431/436 (98%), Gaps = 2/436 (0%)
Strand = Plus / Minus
Query: 5 gaattccaacagaagaaatgtatgttaattggcaaaaggatatatgcagtagctattacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaattccaacagaagaaatgtatgttaattggcaaaaggatatatgcagtagctattacc 377
Query: 65 ttattgatattcaacaaaacttgatgagactaaaaatgtcttatttttaacaacttgtat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttattgatattcaacaaaacttgatgagactaaaaatgtcttatttttaacaacttgtat 317
Query: 125 gttgtgataatgttgatgctagtgctgaagtgcataaaatctttgaacaacatttttcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gttgtgataatgttgatgctagtgctgaagtgcataaaatctttgaacaacatttttcct 257
Query: 185 cacaagtcattctcacaggcactatgattcccttggtagtgaaaagtaagatctgatcat 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 256 cacaagtcattctcacaggcactatgattcccttggcagtgaaaagtaagatctgatcat 197
Query: 245 ttggtgatggttaatcaattggtatgtgcttccctggggaagaccacttctcctgctctt 304
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttggtgttggataatcaattggtatgtgcttccctggggaagaccacttctcctgctctt 137
Query: 305 gacactcgctagttgcacacagttaactgttatcttacttcttcattaactgcatctcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gacactcgctagttgcacacagttaactgttatcttacttcttcattaactgcatctcct 77
Query: 365 ttctatcctttttctag--tttttttgacacaagcacctccagtgttgattgagaatctt 422
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ttctatcctttttctagtttttttttgacacaagcacctccagtgttgattgagaatctt 17
Query: 423 tcttttatcttaaaaa 438
||||||||||||||||
Sbjct: 16 tcttttatcttaaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_k17.g1 MSMg01no370_k17.g1 CHROMAT_FILE:
MSMg01no370_k17.g1 PHD_FILE: MSMg01no370_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:48 2005
(386 letters)
>mm_chr11_91221904_91222689
Length = 786
Score = 685 bits (354), Expect = 0.0
Identities = 374/386 (96%), Gaps = 9/386 (2%)
Strand = Plus / Plus
Query: 1 ttttatcacatgtcctttcacatgcttgggcagaacatccttttacttgtgtccacttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttttatcacatgtcctttcacatgcttgggcagaacatccttttacttgtgtccacttca 269
Query: 61 ggaaaacactccttcatgtgtttgccccagaaaaacaaacaaacaaacaaacaaaaaaac 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 270 ggaaaacactccttcatgtgtttgccccagaaaaacaaacaaac---------aaaaaac 320
Query: 121 caaaaaccaaaacaaaacaacaacaacaaaaacatccaactgactttccaaagaaccctt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaaatcaaaacaaaacaacaacaacaaaaacatccaactgactttccaaagaaccctt 380
Query: 181 aagttgccacttcatactctagccaagttatgaagcctcacaggaagcagtgccaaaatg 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 aagttgccacttcatactctagccaagttatgaagcctcacagaaagcagtgccaaaatg 440
Query: 241 tcagtggcactaatgtaaggggatgctggttttgtcctgtgtttaggagctaagcatcag 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtgtcactaatgtaaggggatgctggttttgtcctgtgtttaggagctaagcatcag 500
Query: 301 ggacagcaggcagatggcaactgactatcaggtccttatttaatggagtagtgcacagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggacagcaggcagatggcaactgactatcaggtccttatttaatggagtagtgcacagtg 560
Query: 361 actccaacaaataaggttgctgagga 386
||||||||||||||||||||||||||
Sbjct: 561 actccaacaaataaggttgctgagga 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
